BLASTX nr result
ID: Coptis25_contig00036453
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00036453 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24120.3| unnamed protein product [Vitis vinifera] 142 3e-32 ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2... 142 3e-32 ref|XP_002315097.1| peroxisomal membrane ABC transporter family,... 135 4e-30 ref|XP_002514370.1| peroxisomal membrane protein, putative [Rici... 134 6e-30 ref|NP_001042413.1| Os01g0218700 [Oryza sativa Japonica Group] g... 132 2e-29 >emb|CBI24120.3| unnamed protein product [Vitis vinifera] Length = 697 Score = 142 bits (358), Expect = 3e-32 Identities = 71/101 (70%), Positives = 77/101 (76%) Frame = -2 Query: 304 EKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFLGRDFYN 125 +++ PD+ TL RRFWKVAAPYW S D TGISVGF+FLGRDFYN Sbjct: 60 KRKAPDIPTLFRRFWKVAAPYWWSDDKVQARLQLAAVFALTLGTTGISVGFNFLGRDFYN 119 Query: 124 ALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLALR 2 ALANKDQEQF+KQLLYYLGAFAGGIPFFVLRDYARE LALR Sbjct: 120 ALANKDQEQFTKQLLYYLGAFAGGIPFFVLRDYAREILALR 160 >ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like [Vitis vinifera] Length = 722 Score = 142 bits (358), Expect = 3e-32 Identities = 71/101 (70%), Positives = 77/101 (76%) Frame = -2 Query: 304 EKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFLGRDFYN 125 +++ PD+ TL RRFWKVAAPYW S D TGISVGF+FLGRDFYN Sbjct: 60 KRKAPDIPTLFRRFWKVAAPYWWSDDKVQARLQLAAVFALTLGTTGISVGFNFLGRDFYN 119 Query: 124 ALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLALR 2 ALANKDQEQF+KQLLYYLGAFAGGIPFFVLRDYARE LALR Sbjct: 120 ALANKDQEQFTKQLLYYLGAFAGGIPFFVLRDYAREILALR 160 >ref|XP_002315097.1| peroxisomal membrane ABC transporter family, PMP family [Populus trichocarpa] gi|222864137|gb|EEF01268.1| peroxisomal membrane ABC transporter family, PMP family [Populus trichocarpa] Length = 651 Score = 135 bits (339), Expect = 4e-30 Identities = 69/97 (71%), Positives = 71/97 (73%) Frame = -2 Query: 292 PDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFLGRDFYNALAN 113 P L TL RRFWKVAAPYW S D TGISVGF+FLGRDFYNALAN Sbjct: 3 PGLNTLFRRFWKVAAPYWFSEDKEPARLQLAAVFALTLGTTGISVGFNFLGRDFYNALAN 62 Query: 112 KDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLALR 2 KDQEQF+KQLLYYLGAFAGGIP FVLRDYARE L LR Sbjct: 63 KDQEQFTKQLLYYLGAFAGGIPLFVLRDYAREILGLR 99 >ref|XP_002514370.1| peroxisomal membrane protein, putative [Ricinus communis] gi|223546467|gb|EEF47966.1| peroxisomal membrane protein, putative [Ricinus communis] Length = 742 Score = 134 bits (338), Expect = 6e-30 Identities = 66/101 (65%), Positives = 75/101 (74%) Frame = -2 Query: 304 EKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFLGRDFYN 125 ++ ++ TL+RRFWKVAAPYW S D TGISVGF+FLGRDFYN Sbjct: 85 QREATEIQTLIRRFWKVAAPYWFSDDKVQARLQLAAVFALTLATTGISVGFNFLGRDFYN 144 Query: 124 ALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLALR 2 ALANKDQ+QF+KQLLYYLG FAGGIPFFVLRDYARE L+LR Sbjct: 145 ALANKDQDQFTKQLLYYLGGFAGGIPFFVLRDYAREILSLR 185 >ref|NP_001042413.1| Os01g0218700 [Oryza sativa Japonica Group] gi|56201622|dbj|BAD73069.1| putative ABC transporter Nda [Oryza sativa Japonica Group] gi|56784087|dbj|BAD81416.1| putative ABC transporter Nda [Oryza sativa Japonica Group] gi|113531944|dbj|BAF04327.1| Os01g0218700 [Oryza sativa Japonica Group] Length = 771 Score = 132 bits (333), Expect = 2e-29 Identities = 68/96 (70%), Positives = 72/96 (75%) Frame = -2 Query: 289 DLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFLGRDFYNALANK 110 DL TL RRFWKVAAPYW S D TGISVGF+FLGRDFYNALA+K Sbjct: 110 DLKTLARRFWKVAAPYWWSEDKVQARLRLAAVFALTLATTGISVGFNFLGRDFYNALADK 169 Query: 109 DQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLALR 2 DQEQF+KQLLYYLG FA GIPFFVLRDYARETL+LR Sbjct: 170 DQEQFTKQLLYYLGGFAVGIPFFVLRDYARETLSLR 205