BLASTX nr result

ID: Coptis25_contig00036447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036447
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002333656.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    77   1e-12

>ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|222858302|gb|EEE95849.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = +1

Query: 1   LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYL 162
           +DGCFI+ELFLR+   D R  DDP+FNTSWM+ +L RDL LLENQIPFF LE+L
Sbjct: 128 VDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEWL 181


>ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|222858301|gb|EEE95848.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = +1

Query: 1   LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYL 162
           +DGCFI+ELFLR+   D R  DDP+FNTSWM+ +L RDL LLENQIPFF LE+L
Sbjct: 59  VDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEWL 112


>ref|XP_002333656.1| predicted protein [Populus trichocarpa] gi|222837953|gb|EEE76318.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = +1

Query: 1   LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYL 162
           +DGCFI+ELFLR+   D R  DDP+FNTSWM+ +L RDL LLENQIPFF LE+L
Sbjct: 4   VDGCFILELFLRFSMADLRLQDDPVFNTSWMVLTLRRDLALLENQIPFFALEWL 57


>ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|222870405|gb|EEF07536.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +1

Query: 4   DGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYLITSNQVD 183
           DGCFI+ELFLR+  +D ++  DPIF TSWM+S+L RDL LLENQIPFF+L  L   + V 
Sbjct: 132 DGCFILELFLRFSSDDAKRQYDPIFTTSWMISTLQRDLALLENQIPFFVLTELY-KHIVR 190

Query: 184 LHPNPSKYLTESALRFF 234
                   L E ALRFF
Sbjct: 191 HTATDQPRLVELALRFF 207


>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/78 (50%), Positives = 51/78 (65%)
 Frame = +1

Query: 1   LDGCFIIELFLRYRFNDRRQDDDPIFNTSWMLSSLNRDLMLLENQIPFFILEYLITSNQV 180
           LDGCFIIELFL+ +    R +DDPIFN + +L+ L+RDL+LLENQ+PFF+LE L    + 
Sbjct: 134 LDGCFIIELFLKNKNKQLRDEDDPIFNRTMVLTDLHRDLILLENQLPFFVLETLFNLIEN 193

Query: 181 DLHPNPSKYLTESALRFF 234
                PS  + E    FF
Sbjct: 194 TDQEGPSTSVLELTYVFF 211


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