BLASTX nr result

ID: Coptis25_contig00036445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036445
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537897.1| PREDICTED: phospholipase A-2-activating prot...   129   2e-28
ref|XP_003541081.1| PREDICTED: phospholipase A-2-activating prot...   129   3e-28
ref|XP_002313065.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002306082.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002284653.1| PREDICTED: phospholipase A-2-activating prot...   122   4e-26

>ref|XP_003537897.1| PREDICTED: phospholipase A-2-activating protein-like [Glycine max]
          Length = 756

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   WPDAMIFPVIDVLRMTILHPNGASLLFKHFKDGNDIVMQTIRKVTTPPAVVANLLPTICA 180
           WP AMIFPVID++RM +LHP+GA LL KHF+  NDI+M+ I+KVT  P + ANLL +I A
Sbjct: 562 WPMAMIFPVIDIVRMLVLHPDGAILLQKHFEAENDILMEVIKKVTVNPTIPANLLTSIRA 621

Query: 181 VTNLFKHSFFHEWLQMHRIEILKAFSSCSTS-NTKVQVSYSTLV 309
           VTNLF++  ++ WLQ HR EIL AFSSCS+S N  +Q+SYSTL+
Sbjct: 622 VTNLFRNLCYYNWLQKHRSEILDAFSSCSSSPNKNLQLSYSTLL 665


>ref|XP_003541081.1| PREDICTED: phospholipase A-2-activating protein-like [Glycine max]
          Length = 756

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/104 (60%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   WPDAMIFPVIDVLRMTILHPNGASLLFKHFKDGNDIVMQTIRKVTTPPAVVANLLPTICA 180
           WP AMIFPVID++RM +LHP+GA LL KHF+  NDI+M+ I+KVT  P + ANLL +I  
Sbjct: 562 WPIAMIFPVIDIVRMLVLHPDGAVLLHKHFEAENDILMEVIKKVTVNPTIPANLLTSIRV 621

Query: 181 VTNLFKHSFFHEWLQMHRIEILKAFSSCSTS-NTKVQVSYSTLV 309
           VTNLF++  ++ WLQ HR EIL AFSSCS+S N  +Q+SYSTL+
Sbjct: 622 VTNLFRNLCYYNWLQKHRSEILDAFSSCSSSPNKNLQLSYSTLL 665


>ref|XP_002313065.1| predicted protein [Populus trichocarpa] gi|222849473|gb|EEE87020.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/104 (57%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   WPDAMIFPVIDVLRMTILHPNGASLLFKHFKDGNDIVMQTIRKVTTPPAVVANLLPTICA 180
           WP AMIFPVID+LRM +LHP+GA++L KH +D NDI+M+ I++VTT P +  NLL  I A
Sbjct: 567 WPLAMIFPVIDILRMLVLHPDGATVLLKHVEDENDILMEMIKRVTTNPPLPPNLLTGIRA 626

Query: 181 VTNLFKHSFFHEWLQMHRIEILKAFSSC-STSNTKVQVSYSTLV 309
           VTNLFK+  +H WLQ H+ EIL  FSSC S+ N  +Q+SY+T++
Sbjct: 627 VTNLFKNLPYHTWLQKHQSEILDVFSSCYSSPNKNLQLSYATMI 670


>ref|XP_002306082.1| predicted protein [Populus trichocarpa] gi|222849046|gb|EEE86593.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/104 (56%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   WPDAMIFPVIDVLRMTILHPNGASLLFKHFKDGNDIVMQTIRKVTTPPAVVANLLPTICA 180
           WP AMIFPVID+LRM +LHP+GA++L KH +D ND +++ I++V T P +  NLL    A
Sbjct: 567 WPLAMIFPVIDILRMLVLHPDGATVLLKHIEDENDTLIEMIKRVATNPPLPPNLLTITRA 626

Query: 181 VTNLFKHSFFHEWLQMHRIEILKAFSSC-STSNTKVQVSYSTLV 309
           VTNLFK+S +H WLQ HR EIL AFSSC S+ N  +Q+SY+T++
Sbjct: 627 VTNLFKNSHYHYWLQKHRSEILDAFSSCYSSPNKNLQLSYATMI 670


>ref|XP_002284653.1| PREDICTED: phospholipase A-2-activating protein [Vitis vinifera]
           gi|297741417|emb|CBI32548.3| unnamed protein product
           [Vitis vinifera]
          Length = 759

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/104 (60%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   WPDAMIFPVIDVLRMTILHPNGASLLFKHFKDGNDIVMQTIRKVTTPPAVVANLLPTICA 180
           WP AMIFPVID+LRM ILHP+GA  L K  +D ND++M  I+K+T  PA+ ANLL +I A
Sbjct: 565 WPIAMIFPVIDILRMIILHPDGAIRLLKLLEDENDVLMDMIKKITVSPALAANLLTSIRA 624

Query: 181 VTNLFKHSFFHEWLQMHRIEILKAFSSC-STSNTKVQVSYSTLV 309
           V NLFK+S +  WL  HR EIL AFSSC S+SN  V +SYSTL+
Sbjct: 625 VCNLFKNSCYSNWLLNHRSEILDAFSSCNSSSNKNVLLSYSTLL 668


Top