BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036430
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...   233   1e-59
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...   229   2e-58
gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]        229   3e-58
ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleop...   210   1e-52

>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
           [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
           protein product [Vitis vinifera]
          Length = 176

 Score =  233 bits (595), Expect = 1e-59
 Identities = 116/167 (69%), Positives = 136/167 (81%)
 Frame = -2

Query: 554 KSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISI 375
           + +EDV  YNSN VKKARL STL+ALL+DPILADVPK+PTL++VDTLI+LELGSAMRIS+
Sbjct: 9   REEEDVGSYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGSAMRISV 68

Query: 374 NKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKL 195
            K+D TSF+VAVLNSATVKDLK A+KKK N+MEQSKMGHRHISWKHVWANFCLS++NDKL
Sbjct: 69  IKLDSTSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLSYYNDKL 128

Query: 194 IDDNTVLQEFGLRNNSQVHFVPXXXXXXXXXXXXXXXXXXXHGLSKR 54
           I+D + LQ+FG+ NNSQVHFVP                   HGL+KR
Sbjct: 129 INDGSALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNKR 175


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 181

 Score =  229 bits (584), Expect = 2e-58
 Identities = 106/143 (74%), Positives = 129/143 (90%)
 Frame = -2

Query: 557 VKSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRIS 378
           +K +E+ VGY+SN VKK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMRIS
Sbjct: 13  IKDEENAVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRIS 72

Query: 377 INKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDK 198
           + K+DGT+ +V ++NSAT+KDLK A+KKK NEMEQSKMGHRHISWKHVWANFCL+H N+K
Sbjct: 73  VLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEK 132

Query: 197 LIDDNTVLQEFGLRNNSQVHFVP 129
           L+DD++VLQ+FG+RNNSQV F+P
Sbjct: 133 LLDDSSVLQDFGIRNNSQVRFIP 155


>gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 181

 Score =  229 bits (583), Expect = 3e-58
 Identities = 105/142 (73%), Positives = 129/142 (90%)
 Frame = -2

Query: 554 KSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISI 375
           K +E+VVGY+SN VKK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMRIS+
Sbjct: 14  KDEENVVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISV 73

Query: 374 NKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKL 195
            K+DGT+ +V ++NSAT+KDLK A+K+K NE EQSKMGHRHISWKHVWANFCL+HHN+K+
Sbjct: 74  LKLDGTAIDVLIMNSATLKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLAHHNEKI 133

Query: 194 IDDNTVLQEFGLRNNSQVHFVP 129
           +DD++VLQ+FG+RNNSQV F+P
Sbjct: 134 LDDSSVLQDFGIRNNSQVRFIP 155


>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  223 bits (568), Expect = 2e-56
 Identities = 110/168 (65%), Positives = 135/168 (80%)
 Frame = -2

Query: 554 KSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISI 375
           K +++V GYNS+ VKKA+LQSTL+ALL+DPIL+DVPKKPTL++VDTLISLE+GSAMRIS+
Sbjct: 6   KGEDEVGGYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAMRISV 65

Query: 374 NKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKL 195
            K+DGTSF+VA++NSATVKDLK A+K+K  EMEQSKMGHRHISWK VWANF LS+HN KL
Sbjct: 66  QKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALSYHNQKL 125

Query: 194 IDDNTVLQEFGLRNNSQVHFVPXXXXXXXXXXXXXXXXXXXHGLSKRS 51
           +DDN+ LQ+ G+RNNSQVHF                     HGL+KR+
Sbjct: 126 LDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKRA 173


>ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 209

 Score =  210 bits (535), Expect = 1e-52
 Identities = 97/128 (75%), Positives = 117/128 (91%)
 Frame = -2

Query: 512 KKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISINKMDGTSFEVAVLN 333
           KK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMRIS+ K+DGT+ +V ++N
Sbjct: 56  KKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAIDVVIMN 115

Query: 332 SATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKLIDDNTVLQEFGLRN 153
           SAT+KDLK A+KKK NEMEQSKMGHRHISWKHVWANFCL+H N+KL+DD++VLQ+FG+RN
Sbjct: 116 SATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRN 175

Query: 152 NSQVHFVP 129
           NSQ+ F+P
Sbjct: 176 NSQIRFIP 183