BLASTX nr result

ID: Coptis25_contig00036429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036429
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610654.1| Cysteine-rich receptor-like protein kinase [...   147   1e-33
ref|XP_002304941.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
emb|CAN65425.1| hypothetical protein VITISV_005300 [Vitis vinifera]   143   1e-32
ref|XP_003632027.1| PREDICTED: cysteine-rich receptor-like prote...   143   2e-32
emb|CBI34088.3| unnamed protein product [Vitis vinifera]              141   6e-32

>ref|XP_003610654.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
           gi|355511989|gb|AES93612.1| Cysteine-rich receptor-like
           protein kinase [Medicago truncatula]
          Length = 644

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/126 (56%), Positives = 95/126 (75%), Gaps = 2/126 (1%)
 Frame = +3

Query: 3   VYSFGVVLLEILCGKRGAGFYLRGQAQSLLTYAWHLWNTGRGMDFVEPLLIESC--SKQD 176
           V+SFGV++LEI+ GKR  GFYL   A +LL YAW LWN G+G++F +P+L+ESC   + +
Sbjct: 512 VFSFGVIMLEIISGKRNGGFYLTELAPTLLAYAWKLWNEGKGLEFADPILLESCLDYESE 571

Query: 177 ALRCIHIGLLCVQEDAADRPSMSFVLLAFGSESLKLPQPRQPAFSVGRILTQTVVEYPSS 356
            LRCIHIGLLCVQED   RP+MS V++  GSES+ LPQPRQPAFS G+++    V+  +S
Sbjct: 572 VLRCIHIGLLCVQEDPQHRPTMSNVVVLLGSESMVLPQPRQPAFSSGKMIR---VDPSAS 628

Query: 357 TLCSIH 374
           T CS++
Sbjct: 629 TNCSLN 634


>ref|XP_002304941.1| predicted protein [Populus trichocarpa] gi|222847905|gb|EEE85452.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  145 bits (365), Expect = 4e-33
 Identities = 65/108 (60%), Positives = 85/108 (78%)
 Frame = +3

Query: 3   VYSFGVVLLEILCGKRGAGFYLRGQAQSLLTYAWHLWNTGRGMDFVEPLLIESCSKQDAL 182
           V+SFGV+LLEI  GKR +GFYL    Q+LL YAW LWN GR M+ V+P L++    +  +
Sbjct: 213 VFSFGVILLEITSGKRSSGFYLSEHRQTLLAYAWRLWNEGREMELVDPSLMDRSQTEGIV 272

Query: 183 RCIHIGLLCVQEDAADRPSMSFVLLAFGSESLKLPQPRQPAFSVGRIL 326
           RCIH+GLLCVQED ADRP+MSFV+LA GS+ + LPQP+QPAFS+G+++
Sbjct: 273 RCIHVGLLCVQEDPADRPTMSFVVLALGSDPIALPQPKQPAFSLGKMV 320


>emb|CAN65425.1| hypothetical protein VITISV_005300 [Vitis vinifera]
          Length = 815

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/125 (56%), Positives = 90/125 (72%)
 Frame = +3

Query: 3    VYSFGVVLLEILCGKRGAGFYLRGQAQSLLTYAWHLWNTGRGMDFVEPLLIESCSKQDAL 182
            V+SFGVVLLEI+ G++ AGF+L G   SLL+YAW LWN G+G++ ++PLL +SC   + L
Sbjct: 684  VFSFGVVLLEIITGRKNAGFHLSGMGLSLLSYAWQLWNEGKGLELMDPLLGDSCCPDEFL 743

Query: 183  RCIHIGLLCVQEDAADRPSMSFVLLAFGSESLKLPQPRQPAFSVGRILTQTVVEYPSSTL 362
            RC HIGLLCVQEDA DRP+MS V++   SESL L QP +PAFSVGR       E  S + 
Sbjct: 744  RCYHIGLLCVQEDAFDRPTMSSVIIMLRSESLSLRQPERPAFSVGRFANNQ--EIASGSS 801

Query: 363  CSIHG 377
             S++G
Sbjct: 802  SSVNG 806


>ref|XP_003632027.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like
           [Vitis vinifera]
          Length = 670

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/125 (56%), Positives = 90/125 (72%)
 Frame = +3

Query: 3   VYSFGVVLLEILCGKRGAGFYLRGQAQSLLTYAWHLWNTGRGMDFVEPLLIESCSKQDAL 182
           V+SFGVVLLEI+ G++ AGF+L G   SLL+YAW LWN G+G++ ++PLL +SC   + L
Sbjct: 539 VFSFGVVLLEIITGRKNAGFHLSGMGLSLLSYAWQLWNEGKGLELMDPLLGDSCCPDEFL 598

Query: 183 RCIHIGLLCVQEDAADRPSMSFVLLAFGSESLKLPQPRQPAFSVGRILTQTVVEYPSSTL 362
           RC HIGLLCVQEDA DRP+MS V++   SESL L QP +PAFSVGR       E  S + 
Sbjct: 599 RCYHIGLLCVQEDAFDRPTMSSVIIMLRSESLTLRQPERPAFSVGRFANNQ--EIASGSS 656

Query: 363 CSIHG 377
            S++G
Sbjct: 657 SSVNG 661


>emb|CBI34088.3| unnamed protein product [Vitis vinifera]
          Length = 171

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/125 (55%), Positives = 91/125 (72%)
 Frame = +3

Query: 3   VYSFGVVLLEILCGKRGAGFYLRGQAQSLLTYAWHLWNTGRGMDFVEPLLIESCSKQDAL 182
           VYSFGVVLLEI+ G++ AGF+L G   SLL++AW  WN G+G++ ++PLL +SC   + L
Sbjct: 40  VYSFGVVLLEIITGRKNAGFHLSGMGPSLLSHAWQSWNEGKGLELMDPLLGDSCCPDEFL 99

Query: 183 RCIHIGLLCVQEDAADRPSMSFVLLAFGSESLKLPQPRQPAFSVGRILTQTVVEYPSSTL 362
           RC HIGLLCVQEDA+DRP+MS V++   SES+ L QP +PAFSVGR   Q   E  S + 
Sbjct: 100 RCYHIGLLCVQEDASDRPTMSSVIVMLKSESVSLRQPERPAFSVGRSTNQH--ETASGSS 157

Query: 363 CSIHG 377
            S++G
Sbjct: 158 SSVNG 162


Top