BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036383
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...   180   5e-43
gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonic...   179   1e-42
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   177   4e-42
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              177   4e-42
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   177   4e-42

>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Glycine max]
          Length = 824

 Score =  180 bits (456), Expect = 5e-43
 Identities = 82/92 (89%), Positives = 87/92 (94%)
 Frame = +3

Query: 3    YVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNVTK 182
            YVPDYSFVLQDVEEDEKE+ILTSHSERLAI FGIISTPPK+PI IFKNLRVCGDCHN TK
Sbjct: 733  YVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATK 792

Query: 183  YISKITEREIVVRDSNRFHHFSNGDCSCGDHW 278
            YISKITEREI+VRDSNRFHHF +G CSCGD+W
Sbjct: 793  YISKITEREIIVRDSNRFHHFKDGICSCGDYW 824


>gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
           gi|125586550|gb|EAZ27214.1| hypothetical protein
           OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  179 bits (453), Expect = 1e-42
 Identities = 80/92 (86%), Positives = 87/92 (94%)
 Frame = +3

Query: 3   YVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNVTK 182
           YVPDYSFVLQDVEEDEKEQIL +HSERLAIAFGII+TPP+TP+HI+KNLRVCGDCHN TK
Sbjct: 657 YVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATK 716

Query: 183 YISKITEREIVVRDSNRFHHFSNGDCSCGDHW 278
           YISKITEREI+VRDSNRFHHF +G CSCGD W
Sbjct: 717 YISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  177 bits (448), Expect = 4e-42
 Identities = 80/92 (86%), Positives = 87/92 (94%)
 Frame = +3

Query: 3    YVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNVTK 182
            Y+PDYSFVLQDVEEDEKE ILTSHSERLAIAFGIISTPPK+PI IFKNLRVCGDCHN TK
Sbjct: 800  YIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATK 859

Query: 183  YISKITEREIVVRDSNRFHHFSNGDCSCGDHW 278
            +IS+IT+REIVVRDSNRFHHF +G CSCGD+W
Sbjct: 860  FISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  177 bits (448), Expect = 4e-42
 Identities = 80/92 (86%), Positives = 87/92 (94%)
 Frame = +3

Query: 3   YVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNVTK 182
           Y+PDYSFVLQDVEEDEKE ILTSHSERLAIAFGIISTPPK+PI IFKNLRVCGDCHN TK
Sbjct: 567 YIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATK 626

Query: 183 YISKITEREIVVRDSNRFHHFSNGDCSCGDHW 278
           +IS+IT+REIVVRDSNRFHHF +G CSCGD+W
Sbjct: 627 FISRITQREIVVRDSNRFHHFKDGICSCGDYW 658


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  177 bits (448), Expect = 4e-42
 Identities = 80/92 (86%), Positives = 87/92 (94%)
 Frame = +3

Query: 3    YVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNVTK 182
            Y+PDYSFVLQDVEEDEKE ILTSHSERLAIAFGIISTPPK+PI IFKNLRVCGDCHN TK
Sbjct: 800  YIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATK 859

Query: 183  YISKITEREIVVRDSNRFHHFSNGDCSCGDHW 278
            +IS+IT+REIVVRDSNRFHHF +G CSCGD+W
Sbjct: 860  FISRITQREIVVRDSNRFHHFKDGICSCGDYW 891