BLASTX nr result

ID: Coptis25_contig00036341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036341
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255...   121   7e-26
ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002513591.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
ref|NP_001032066.1| uncharacterized protein [Arabidopsis thalian...   109   2e-22
dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]        109   2e-22

>ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255280 [Vitis vinifera]
           gi|302143706|emb|CBI22567.3| unnamed protein product
           [Vitis vinifera]
          Length = 673

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/97 (55%), Positives = 76/97 (78%)
 Frame = +1

Query: 1   LCMRAVCALYRRHISEENSKSGSLHSDNRGFNKVDAMRGTNLAEFLMDGNREGDITKSIQ 180
           LCM+AVCALYR+  SEE +   +++S+ RGF++ DA+RGT LAE+L DG+ +GD+ KS++
Sbjct: 575 LCMKAVCALYRQQTSEEKTVKETIYSNQRGFSQCDALRGTTLAEYLTDGDPQGDLKKSVK 634

Query: 181 ELEMYSPKGLEECKRLARWYSKQLFTVYKSKEDAFFL 291
           +L+ Y PK LE C+ LA  YSKQLF +Y++KED FFL
Sbjct: 635 DLQQYHPKALELCRTLATHYSKQLFAIYQNKEDPFFL 671


>ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|222875058|gb|EEF12189.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/98 (56%), Positives = 72/98 (73%)
 Frame = +1

Query: 1   LCMRAVCALYRRHISEENSKSGSLHSDNRGFNKVDAMRGTNLAEFLMDGNREGDITKSIQ 180
           LCM+AVCALYR+   EE     +LH + RGF+K DA RG+ LAEFL+DG+  GD+ KS+ 
Sbjct: 477 LCMKAVCALYRQQSDEEKLNKETLHGNGRGFSKFDAPRGSKLAEFLIDGDPSGDLKKSVL 536

Query: 181 ELEMYSPKGLEECKRLARWYSKQLFTVYKSKEDAFFLP 294
           EL+ Y+ KG+  C++LA  YSKQLF +YK+KED  FLP
Sbjct: 537 ELQAYNSKGVTLCRKLATHYSKQLFQIYKNKEDPLFLP 574


>ref|XP_002513591.1| conserved hypothetical protein [Ricinus communis]
           gi|223547499|gb|EEF48994.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 638

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/98 (51%), Positives = 73/98 (74%)
 Frame = +1

Query: 1   LCMRAVCALYRRHISEENSKSGSLHSDNRGFNKVDAMRGTNLAEFLMDGNREGDITKSIQ 180
           LCM+AVCALYR+  ++E     +++++ RGF+K DA+RG++LA FL+DG+ +GD+ KS+Q
Sbjct: 539 LCMKAVCALYRQQTADEQLSKETMYNNKRGFSKFDALRGSDLARFLIDGDPQGDLKKSVQ 598

Query: 181 ELEMYSPKGLEECKRLARWYSKQLFTVYKSKEDAFFLP 294
           +LE    K ++ C+ LA  YSKQLF +YKSKED  F P
Sbjct: 599 QLEELGSKAVKLCRTLAARYSKQLFEIYKSKEDPLFRP 636


>ref|NP_001032066.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79536815|ref|NP_200134.2| uncharacterized protein
           [Arabidopsis thaliana] gi|186531691|ref|NP_001119424.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|60547941|gb|AAX23934.1| hypothetical protein
           At5g53220 [Arabidopsis thaliana]
           gi|332008941|gb|AED96324.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332008942|gb|AED96325.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332008943|gb|AED96326.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 368

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/96 (53%), Positives = 72/96 (75%)
 Frame = +1

Query: 1   LCMRAVCALYRRHISEENSKSGSLHSDNRGFNKVDAMRGTNLAEFLMDGNREGDITKSIQ 180
           LCMRAVC L+R    +E  +  S  S+ RGF+KVDA+RGT++A FL DG+  GD+ KS++
Sbjct: 267 LCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVE 326

Query: 181 ELEMYSPKGLEECKRLARWYSKQLFTVYKSKEDAFF 288
           EL+++  KG+E+C+ LAR YSKQLF +Y ++ED FF
Sbjct: 327 ELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPFF 362


>dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]
          Length = 441

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/96 (53%), Positives = 72/96 (75%)
 Frame = +1

Query: 1   LCMRAVCALYRRHISEENSKSGSLHSDNRGFNKVDAMRGTNLAEFLMDGNREGDITKSIQ 180
           LCMRAVC L+R    +E  +  S  S+ RGF+KVDA+RGT++A FL DG+  GD+ KS++
Sbjct: 340 LCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVE 399

Query: 181 ELEMYSPKGLEECKRLARWYSKQLFTVYKSKEDAFF 288
           EL+++  KG+E+C+ LAR YSKQLF +Y ++ED FF
Sbjct: 400 ELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPFF 435


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