BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036336
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16134.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31

>emb|CBI16134.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/90 (75%), Positives = 81/90 (90%)
 Frame = +1

Query: 1   VKRSTPWLETTLLVVELFADRGDVENVKRLFTELKEARYSRYTFVYNTLIKAHVKAKIYD 180
           +++S PWLETTL +VE+F++ GDVEN ++LF ELK A Y+RYTFVYNTLIKA+VKAK+YD
Sbjct: 364 IRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVYD 423

Query: 181 PELLRKMILGGARPDAVTYSLMKLAEQFQT 270
           P LLR+MILGGARPDA TYSLMKLAEQFQT
Sbjct: 424 PNLLRRMILGGARPDAETYSLMKLAEQFQT 453


>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial [Vitis vinifera]
          Length = 550

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/90 (75%), Positives = 81/90 (90%)
 Frame = +1

Query: 1   VKRSTPWLETTLLVVELFADRGDVENVKRLFTELKEARYSRYTFVYNTLIKAHVKAKIYD 180
           +++S PWLETTL +VE+F++ GDVEN ++LF ELK A Y+RYTFVYNTLIKA+VKAK+YD
Sbjct: 461 IRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVYD 520

Query: 181 PELLRKMILGGARPDAVTYSLMKLAEQFQT 270
           P LLR+MILGGARPDA TYSLMKLAEQFQT
Sbjct: 521 PNLLRRMILGGARPDAETYSLMKLAEQFQT 550


>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Glycine max]
          Length = 507

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/90 (74%), Positives = 81/90 (90%)
 Frame = +1

Query: 1   VKRSTPWLETTLLVVELFADRGDVENVKRLFTELKEARYSRYTFVYNTLIKAHVKAKIYD 180
           V+ STPWLETTL +VE+FA++GDV NV+RLF E  +A+Y RYTFVYNTLIKA+VKAKIY+
Sbjct: 418 VRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYNTLIKAYVKAKIYN 477

Query: 181 PELLRKMILGGARPDAVTYSLMKLAEQFQT 270
           P LL++MILGGARPDA TYSL+K+AEQFQT
Sbjct: 478 PNLLKRMILGGARPDAETYSLLKIAEQFQT 507


>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
           gi|449517541|ref|XP_004165804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/90 (71%), Positives = 84/90 (93%)
 Frame = +1

Query: 1   VKRSTPWLETTLLVVELFADRGDVENVKRLFTELKEARYSRYTFVYNTLIKAHVKAKIYD 180
           V++STPWLETTL ++E+ A+RGD+EN ++LF ELKEA+Y+RYTFVYNTLIKA+VKAKI++
Sbjct: 438 VRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLIKAYVKAKIHN 497

Query: 181 PELLRKMILGGARPDAVTYSLMKLAEQFQT 270
           P LLR+MI+GGARPD+ TYSL+KL+EQFQ+
Sbjct: 498 PNLLRRMIVGGARPDSETYSLIKLSEQFQS 527


>ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Glycine max]
          Length = 507

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/90 (71%), Positives = 80/90 (88%)
 Frame = +1

Query: 1   VKRSTPWLETTLLVVELFADRGDVENVKRLFTELKEARYSRYTFVYNTLIKAHVKAKIYD 180
           V+ S PWLETTL +VE+FA++GD+ NV+RLF E  +++Y RYTFVYNTLIKA+VKAKIYD
Sbjct: 418 VRNSIPWLETTLSIVEIFAEKGDMGNVERLFEEFHKSKYCRYTFVYNTLIKAYVKAKIYD 477

Query: 181 PELLRKMILGGARPDAVTYSLMKLAEQFQT 270
           P LL++MILGGARPDA TYSL+K+AEQF+T
Sbjct: 478 PNLLKRMILGGARPDAETYSLLKIAEQFRT 507