BLASTX nr result

ID: Coptis25_contig00036324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036324
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522047.1| PREDICTED: uncharacterized protein LOC100789...   422   e-116
ref|XP_002264310.2| PREDICTED: uncharacterized protein LOC100246...   420   e-115
emb|CBI18110.3| unnamed protein product [Vitis vinifera]              420   e-115
ref|XP_002323026.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115
ref|XP_003516393.1| PREDICTED: uncharacterized protein LOC100789...   415   e-114

>ref|XP_003522047.1| PREDICTED: uncharacterized protein LOC100789158 [Glycine max]
          Length = 464

 Score =  422 bits (1084), Expect = e-116
 Identities = 194/241 (80%), Positives = 209/241 (86%)
 Frame = +2

Query: 2   RSMSPNAALTIFRAEEYNATVEFYWAPLLVESNSDDPVNHRLDDRIIRPDSVGRHASQWE 181
           RSMSPNA LTIFRAEEYNATVEF WAPLL ESNSDDPVNHRLD+RIIRPD+V RHAS WE
Sbjct: 224 RSMSPNAHLTIFRAEEYNATVEFLWAPLLAESNSDDPVNHRLDERIIRPDTVLRHASLWE 283

Query: 182 NADILIFNTYLWWRQGPIKLLWTKEENGICEELDGIGAMELAMESWANWVASKVDPVKKR 361
           NADIL+FNTYLWWRQGP+KLLWT EENG CEELDG GAMELAM +WA+WV+SKVDP+KKR
Sbjct: 284 NADILVFNTYLWWRQGPVKLLWTHEENGACEELDGHGAMELAMGAWADWVSSKVDPLKKR 343

Query: 362 VFFVTMSPTHLWSREWEPGTEGNCYHEKTPIKRYGYWGSGSDLPTMRMVEKVLSGVSSKV 541
           VFFVTMSPTHLWSREW+PG+EGNCY EK PI   GYWGSGSDLPTM  VEK+LS +SSKV
Sbjct: 344 VFFVTMSPTHLWSREWKPGSEGNCYGEKDPIDNEGYWGSGSDLPTMSTVEKILSNLSSKV 403

Query: 542 YVLNITQLSEYRKDGHPSVYRKFWETXXXXXXXXXXXXXDCIHWCLPGVPDVWNELLFHF 721
            V+NITQLSEYRKDGHPS++RKFWE              DCIHWCLPGVPDVWNELLFHF
Sbjct: 404 SVINITQLSEYRKDGHPSIFRKFWEPLRPEQLSNPPSYSDCIHWCLPGVPDVWNELLFHF 463

Query: 722 L 724
           L
Sbjct: 464 L 464


>ref|XP_002264310.2| PREDICTED: uncharacterized protein LOC100246524 [Vitis vinifera]
          Length = 445

 Score =  420 bits (1080), Expect = e-115
 Identities = 192/241 (79%), Positives = 211/241 (87%)
 Frame = +2

Query: 2   RSMSPNAALTIFRAEEYNATVEFYWAPLLVESNSDDPVNHRLDDRIIRPDSVGRHASQWE 181
           RSMSPNA LTIFRAEEYNAT+EF WAPLLVESNSDDPVNHRLD+RI+RPDSV +HASQWE
Sbjct: 206 RSMSPNAPLTIFRAEEYNATIEFLWAPLLVESNSDDPVNHRLDERIMRPDSVLKHASQWE 265

Query: 182 NADILIFNTYLWWRQGPIKLLWTKEENGICEELDGIGAMELAMESWANWVASKVDPVKKR 361
           +ADIL+FNTYLWWRQGP+KLLW+ EEN +CEELDG+GAMELAME+WANWVA+K DP+KK 
Sbjct: 266 HADILVFNTYLWWRQGPVKLLWSTEENRVCEELDGLGAMELAMEAWANWVATKADPLKK- 324

Query: 362 VFFVTMSPTHLWSREWEPGTEGNCYHEKTPIKRYGYWGSGSDLPTMRMVEKVLSGVSSKV 541
           +FFVTMSPTHLWSREW+PG+EGNCY EKTPI    YWGSGSDLPTMRMVEKV+  + SKV
Sbjct: 325 IFFVTMSPTHLWSREWKPGSEGNCYDEKTPIDDESYWGSGSDLPTMRMVEKVVGRLGSKV 384

Query: 542 YVLNITQLSEYRKDGHPSVYRKFWETXXXXXXXXXXXXXDCIHWCLPGVPDVWNELLFHF 721
            VLNITQLSEYRKDGHPS+YRKFWE              DCIHWCLPGVPDVWNELLFHF
Sbjct: 385 TVLNITQLSEYRKDGHPSIYRKFWEALGPKQLSNPASYSDCIHWCLPGVPDVWNELLFHF 444

Query: 722 L 724
           L
Sbjct: 445 L 445


>emb|CBI18110.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  420 bits (1080), Expect = e-115
 Identities = 192/241 (79%), Positives = 211/241 (87%)
 Frame = +2

Query: 2   RSMSPNAALTIFRAEEYNATVEFYWAPLLVESNSDDPVNHRLDDRIIRPDSVGRHASQWE 181
           RSMSPNA LTIFRAEEYNAT+EF WAPLLVESNSDDPVNHRLD+RI+RPDSV +HASQWE
Sbjct: 205 RSMSPNAPLTIFRAEEYNATIEFLWAPLLVESNSDDPVNHRLDERIMRPDSVLKHASQWE 264

Query: 182 NADILIFNTYLWWRQGPIKLLWTKEENGICEELDGIGAMELAMESWANWVASKVDPVKKR 361
           +ADIL+FNTYLWWRQGP+KLLW+ EEN +CEELDG+GAMELAME+WANWVA+K DP+KK 
Sbjct: 265 HADILVFNTYLWWRQGPVKLLWSTEENRVCEELDGLGAMELAMEAWANWVATKADPLKK- 323

Query: 362 VFFVTMSPTHLWSREWEPGTEGNCYHEKTPIKRYGYWGSGSDLPTMRMVEKVLSGVSSKV 541
           +FFVTMSPTHLWSREW+PG+EGNCY EKTPI    YWGSGSDLPTMRMVEKV+  + SKV
Sbjct: 324 IFFVTMSPTHLWSREWKPGSEGNCYDEKTPIDDESYWGSGSDLPTMRMVEKVVGRLGSKV 383

Query: 542 YVLNITQLSEYRKDGHPSVYRKFWETXXXXXXXXXXXXXDCIHWCLPGVPDVWNELLFHF 721
            VLNITQLSEYRKDGHPS+YRKFWE              DCIHWCLPGVPDVWNELLFHF
Sbjct: 384 TVLNITQLSEYRKDGHPSIYRKFWEALGPKQLSNPASYSDCIHWCLPGVPDVWNELLFHF 443

Query: 722 L 724
           L
Sbjct: 444 L 444


>ref|XP_002323026.1| predicted protein [Populus trichocarpa] gi|222867656|gb|EEF04787.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  419 bits (1078), Expect = e-115
 Identities = 191/241 (79%), Positives = 210/241 (87%)
 Frame = +2

Query: 2   RSMSPNAALTIFRAEEYNATVEFYWAPLLVESNSDDPVNHRLDDRIIRPDSVGRHASQWE 181
           RSMSPNA LTIFRAEEYNAT+EF WAPLLV+SNSDDPVNHRLD+RI+RPDSV +H+S+WE
Sbjct: 207 RSMSPNAPLTIFRAEEYNATIEFLWAPLLVDSNSDDPVNHRLDERIMRPDSVLKHSSKWE 266

Query: 182 NADILIFNTYLWWRQGPIKLLWTKEENGICEELDGIGAMELAMESWANWVASKVDPVKKR 361
           +ADIL+FN+YLWWRQGP+KLLW+ EENG CEELDG+GAMELAM +WA+WVASKVDP KKR
Sbjct: 267 HADILVFNSYLWWRQGPVKLLWSAEENGACEELDGLGAMELAMGAWADWVASKVDPQKKR 326

Query: 362 VFFVTMSPTHLWSREWEPGTEGNCYHEKTPIKRYGYWGSGSDLPTMRMVEKVLSGVSSKV 541
           VFFVTMSPTHLWSREWEPG+ GNCY EK PI   GYWGSGSD+PTMRMVEKVL  + SKV
Sbjct: 327 VFFVTMSPTHLWSREWEPGSNGNCYSEKMPIDWEGYWGSGSDMPTMRMVEKVLGRLGSKV 386

Query: 542 YVLNITQLSEYRKDGHPSVYRKFWETXXXXXXXXXXXXXDCIHWCLPGVPDVWNELLFHF 721
            VLNITQLSEYRKDGHPS+YRKFWET             DCIHWCLPGVPDVWNELLFH 
Sbjct: 387 SVLNITQLSEYRKDGHPSIYRKFWETLSPEQLSNPKSYSDCIHWCLPGVPDVWNELLFHL 446

Query: 722 L 724
           L
Sbjct: 447 L 447


>ref|XP_003516393.1| PREDICTED: uncharacterized protein LOC100789791 [Glycine max]
          Length = 447

 Score =  415 bits (1066), Expect = e-114
 Identities = 191/241 (79%), Positives = 208/241 (86%)
 Frame = +2

Query: 2   RSMSPNAALTIFRAEEYNATVEFYWAPLLVESNSDDPVNHRLDDRIIRPDSVGRHASQWE 181
           RSMSPNA LTIFRAEEYNATVEF WAPLLVESNSDDPVNHRLD+RIIRPD+V RHAS WE
Sbjct: 207 RSMSPNAHLTIFRAEEYNATVEFLWAPLLVESNSDDPVNHRLDERIIRPDTVLRHASLWE 266

Query: 182 NADILIFNTYLWWRQGPIKLLWTKEENGICEELDGIGAMELAMESWANWVASKVDPVKKR 361
           NADIL+FNTYLWWRQGP+KLLWT EENG CEELDG GAMELAM +WA+WV+SKVDP+ KR
Sbjct: 267 NADILVFNTYLWWRQGPVKLLWTAEENGACEELDGHGAMELAMGAWADWVSSKVDPLMKR 326

Query: 362 VFFVTMSPTHLWSREWEPGTEGNCYHEKTPIKRYGYWGSGSDLPTMRMVEKVLSGVSSKV 541
           VFFVTMSPTHLWSREW+PG++GNCY EK PI   GYWGSGSDLPTM  VEK+L  ++SKV
Sbjct: 327 VFFVTMSPTHLWSREWKPGSKGNCYGEKDPIDLEGYWGSGSDLPTMSTVEKILRHLNSKV 386

Query: 542 YVLNITQLSEYRKDGHPSVYRKFWETXXXXXXXXXXXXXDCIHWCLPGVPDVWNELLFHF 721
            V+NITQLSEYRKDGHPS++RKFWE              DCIHWCLPGVPDVWNELLFHF
Sbjct: 387 SVINITQLSEYRKDGHPSIFRKFWEPLRPEQLSNPPSYSDCIHWCLPGVPDVWNELLFHF 446

Query: 722 L 724
           L
Sbjct: 447 L 447


Top