BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036316
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    57   1e-06
ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    57   1e-06
emb|CBI32131.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    57   2e-06
ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31,...    57   2e-06

>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/78 (46%), Positives = 43/78 (55%)
 Frame = -2

Query: 239 KPLPVPDLTSXXXXXXXXXXXXXXXRYAITNMKKLVNRMQFGVPEKSSLXXXXXXXXXXX 60
           KPLPVPD +                RYAIT+M+KL NRMQFGVPE+SSL           
Sbjct: 344 KPLPVPD-SEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGML 402

Query: 59  XXXGCGKMRVTVNHSRLA 6
              G GK+RV+V  S+LA
Sbjct: 403 GQAGSGKLRVSVGQSKLA 420


>ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/78 (46%), Positives = 43/78 (55%)
 Frame = -2

Query: 239 KPLPVPDLTSXXXXXXXXXXXXXXXRYAITNMKKLVNRMQFGVPEKSSLXXXXXXXXXXX 60
           KPLPVPD +                RYAIT+M+KL NRMQFGVPE+SSL           
Sbjct: 344 KPLPVPD-SEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGML 402

Query: 59  XXXGCGKMRVTVNHSRLA 6
              G GK+RV+V  S+LA
Sbjct: 403 GQAGSGKLRVSVGQSKLA 420


>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/78 (46%), Positives = 43/78 (55%)
 Frame = -2

Query: 239 KPLPVPDLTSXXXXXXXXXXXXXXXRYAITNMKKLVNRMQFGVPEKSSLXXXXXXXXXXX 60
           KPLPVPD +                RYAIT+M+KL NRMQFGVPE+SSL           
Sbjct: 381 KPLPVPD-SEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGML 439

Query: 59  XXXGCGKMRVTVNHSRLA 6
              G GK+RV+V  S+LA
Sbjct: 440 GQAGNGKLRVSVGQSKLA 457


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/78 (46%), Positives = 43/78 (55%)
 Frame = -2

Query: 239 KPLPVPDLTSXXXXXXXXXXXXXXXRYAITNMKKLVNRMQFGVPEKSSLXXXXXXXXXXX 60
           KPLPVPD +                RYAIT+M+KL NRMQFGVPE+SSL           
Sbjct: 347 KPLPVPD-SEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGML 405

Query: 59  XXXGCGKMRVTVNHSRLA 6
              G GK+RV+V  S+LA
Sbjct: 406 GQAGNGKLRVSVGQSKLA 423


>ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis] gi|223535305|gb|EEF36980.1| U4/U6 small
           nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis]
          Length = 774

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/78 (43%), Positives = 43/78 (55%)
 Frame = -2

Query: 239 KPLPVPDLTSXXXXXXXXXXXXXXXRYAITNMKKLVNRMQFGVPEKSSLXXXXXXXXXXX 60
           KPLPVPD +                RYA+T+M+KL NRMQFGVPE+SSL           
Sbjct: 659 KPLPVPD-SEPKKKRGGRRLRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGML 717

Query: 59  XXXGCGKMRVTVNHSRLA 6
              G GK+RV++  S+LA
Sbjct: 718 GQAGSGKLRVSIGQSKLA 735