BLASTX nr result

ID: Coptis25_contig00036312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036312
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283938.1| PREDICTED: uncharacterized protein LOC100258...   150   8e-35
ref|XP_002305167.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
gb|ABK94526.1| unknown [Populus trichocarpa]                          150   1e-34
ref|XP_004171611.1| PREDICTED: elongator complex protein 5-like ...   147   7e-34
ref|XP_004145651.1| PREDICTED: elongator complex protein 5-like ...   147   7e-34

>ref|XP_002283938.1| PREDICTED: uncharacterized protein LOC100258368 [Vitis vinifera]
           gi|296087267|emb|CBI33641.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/109 (63%), Positives = 87/109 (79%)
 Frame = +1

Query: 31  MAESICRALRDGALEGEHAPALTIKDTLHTPYGFQAFTHVLCSLSSNILSAKSQSKCLVL 210
           MAESICR LRDGALEGEHAPAL+IKD++ TP+G   F +VL  LSSNIL+ KSQSK +VL
Sbjct: 1   MAESICRNLRDGALEGEHAPALSIKDSIATPFGSDVFNYVLTKLSSNILAGKSQSKGIVL 60

Query: 211 IAFEKSPSFYYELLRSKGVDVNTMKNWLRILDCYSDPLGWKDGITGSND 357
           +AF +SPSFY + L++ G+D+ + K W+ ILDCY+DPLGWKD + G  D
Sbjct: 61  VAFSRSPSFYVDFLKTNGIDLVSAKKWISILDCYTDPLGWKDSLKGPLD 109


>ref|XP_002305167.1| predicted protein [Populus trichocarpa] gi|222848131|gb|EEE85678.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  150 bits (379), Expect = 1e-34
 Identities = 68/109 (62%), Positives = 90/109 (82%)
 Frame = +1

Query: 31  MAESICRALRDGALEGEHAPALTIKDTLHTPYGFQAFTHVLCSLSSNILSAKSQSKCLVL 210
           MAES+CR LRDG+LEGE APALTIKDT  +P+GF  F+HVL  LSS IL++KSQS+ +V+
Sbjct: 1   MAESMCRTLRDGSLEGEQAPALTIKDTAASPFGFHVFSHVLSQLSSFILASKSQSRGIVI 60

Query: 211 IAFEKSPSFYYELLRSKGVDVNTMKNWLRILDCYSDPLGWKDGITGSND 357
           +AF +SPSFY +LL+S+G+DVN+   W++ILDCY+DPL WKD + GS +
Sbjct: 61  VAFSRSPSFYVDLLKSRGIDVNSSHKWVQILDCYTDPLCWKDQLMGSGN 109


>gb|ABK94526.1| unknown [Populus trichocarpa]
          Length = 379

 Score =  150 bits (379), Expect = 1e-34
 Identities = 68/109 (62%), Positives = 90/109 (82%)
 Frame = +1

Query: 31  MAESICRALRDGALEGEHAPALTIKDTLHTPYGFQAFTHVLCSLSSNILSAKSQSKCLVL 210
           MAES+CR LRDG+LEGE APALTIKDT  +P+GF  F+HVL  LSS IL++KSQS+ +V+
Sbjct: 1   MAESMCRTLRDGSLEGEQAPALTIKDTAASPFGFHVFSHVLSQLSSFILASKSQSRGIVI 60

Query: 211 IAFEKSPSFYYELLRSKGVDVNTMKNWLRILDCYSDPLGWKDGITGSND 357
           +AF +SPSFY +LL+S+G+DVN+   W++ILDCY+DPL WKD + GS +
Sbjct: 61  VAFSRSPSFYVDLLKSRGIDVNSSHKWVQILDCYTDPLCWKDQLMGSGN 109


>ref|XP_004171611.1| PREDICTED: elongator complex protein 5-like [Cucumis sativus]
          Length = 178

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/101 (65%), Positives = 87/101 (86%)
 Frame = +1

Query: 31  MAESICRALRDGALEGEHAPALTIKDTLHTPYGFQAFTHVLCSLSSNILSAKSQSKCLVL 210
           MAESICRALRDGAL+GE APALTIKD +++P+GF AF+HVL  LSSNIL+ KSQS+ LVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 211 IAFEKSPSFYYELLRSKGVDVNTMKNWLRILDCYSDPLGWK 333
           ++F +SP++Y +LL+ +G+DV +   W++ILDCY+DPLGWK
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWK 101


>ref|XP_004145651.1| PREDICTED: elongator complex protein 5-like [Cucumis sativus]
          Length = 375

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/101 (65%), Positives = 87/101 (86%)
 Frame = +1

Query: 31  MAESICRALRDGALEGEHAPALTIKDTLHTPYGFQAFTHVLCSLSSNILSAKSQSKCLVL 210
           MAESICRALRDGAL+GE APALTIKD +++P+GF AF+HVL  LSSNIL+ KSQS+ LVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 211 IAFEKSPSFYYELLRSKGVDVNTMKNWLRILDCYSDPLGWK 333
           ++F +SP++Y +LL+ +G+DV +   W++ILDCY+DPLGWK
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWK 101


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