BLASTX nr result

ID: Coptis25_contig00036267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036267
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73072.1| hypothetical protein VITISV_032384 [Vitis vinifera]   139   2e-31
dbj|BAJ53124.1| JHL07K02.14 [Jatropha curcas]                         136   2e-30
ref|XP_002511084.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|NP_568942.1| uncharacterized protein [Arabidopsis thaliana] ...   112   2e-23
ref|XP_002864758.1| hypothetical protein ARALYDRAFT_496355 [Arab...   110   1e-22

>emb|CAN73072.1| hypothetical protein VITISV_032384 [Vitis vinifera]
          Length = 413

 Score =  139 bits (350), Expect = 2e-31
 Identities = 73/143 (51%), Positives = 101/143 (70%)
 Frame = +1

Query: 4   AGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYLSSIH 183
           A K+  EKQRL++ QLV +LR+IE QVNSH  +I QTLADHR  LHK FQ++ISY+++IH
Sbjct: 30  AAKEQKEKQRLEITQLVRLLRQIETQVNSHHGDIRQTLADHRRSLHKSFQKAISYIAAIH 89

Query: 184 QTGQTNEAFLVASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAE 363
            + Q  E  L   L + + T   V +AL +V+ GVE+L+ +L+++MC PL++YVK LK E
Sbjct: 90  HSCQNQETLLFV-LNVFQITLRQVDAALNAVESGVEDLMQQLAQQMCNPLVEYVKRLKTE 148

Query: 364 MASGALIRLVAMVEEMKGVVRDG 432
              G   RL+AMVEEM+  +RDG
Sbjct: 149 TTLGTFARLLAMVEEMEREIRDG 171


>dbj|BAJ53124.1| JHL07K02.14 [Jatropha curcas]
          Length = 430

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/143 (46%), Positives = 100/143 (69%)
 Frame = +1

Query: 4   AGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYLSSIH 183
           AGK+L+EKQ+  L  LV +LR++E QVN HQD I +TL +HR  LH  FQ++I Y+S +H
Sbjct: 136 AGKELMEKQQTNLLHLVQLLRQVEIQVNCHQDEIFETLDNHRASLHNLFQKAIHYISDVH 195

Query: 184 QTGQTNEAFLVASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAE 363
              + N    + +L LL+  F +V + L SV+ GV NL+ EL+++MC P+++YVK LK +
Sbjct: 196 SQNRDN---FLTTLNLLQVMFNNVDAILGSVEGGVNNLMQELAEKMCNPMVEYVKSLKDD 252

Query: 364 MASGALIRLVAMVEEMKGVVRDG 432
           M +G  +RL+AMVEEM+ ++ +G
Sbjct: 253 MKNGTCVRLLAMVEEMERMISNG 275


>ref|XP_002511084.1| conserved hypothetical protein [Ricinus communis]
           gi|223550199|gb|EEF51686.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/143 (44%), Positives = 102/143 (71%)
 Frame = +1

Query: 4   AGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYLSSIH 183
           AGK+L+ KQ   L QLV +LR+ E +VN  Q++I++TL  HR  LHKFFQ++  ++S++H
Sbjct: 159 AGKELMVKQHTNLLQLVQLLRQTEIRVNHRQNDILETLGSHRASLHKFFQKAFYHISTLH 218

Query: 184 QTGQTNEAFLVASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAE 363
                N   ++ ++KLL+  F +V++ L SV+ GVE+L+ +L+ +MC P+++YVK LK +
Sbjct: 219 SQ---NHDIILVTVKLLQHVFNNVNAVLSSVEGGVEDLVQDLASKMCNPMVEYVKGLKDD 275

Query: 364 MASGALIRLVAMVEEMKGVVRDG 432
           M +G  +RL+ +VEEM+ V+RDG
Sbjct: 276 MKNGTCVRLLTIVEEMEIVMRDG 298


>ref|NP_568942.1| uncharacterized protein [Arabidopsis thaliana]
           gi|63003874|gb|AAY25466.1| At5g61865 [Arabidopsis
           thaliana] gi|109946451|gb|ABG48404.1| At5g61865
           [Arabidopsis thaliana] gi|332010143|gb|AED97526.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 417

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/137 (42%), Positives = 92/137 (67%)
 Frame = +1

Query: 4   AGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYLSSIH 183
           AGK+++ K + QL+QLVH+L+ IE QVNSH+++I+Q + D R    +F Q+S+ YLSS+H
Sbjct: 134 AGKEILHKHKGQLRQLVHMLKHIETQVNSHREDILQMVDDRRTFFQEFIQKSLYYLSSVH 193

Query: 184 QTGQTNEAFLVASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAE 363
              Q ++ F V ++KLLR  F +++  L SV  GV + +  L+K MC P+  YV +L AE
Sbjct: 194 --SQNHDTFPV-TVKLLRVLFNNINEVLGSVDTGVNDFMQALAKNMCHPMTKYVGNLAAE 250

Query: 364 MASGALIRLVAMVEEMK 414
           +  G  ++L+ +V EM+
Sbjct: 251 IKHGPCVQLMNVVNEME 267


>ref|XP_002864758.1| hypothetical protein ARALYDRAFT_496355 [Arabidopsis lyrata subsp.
           lyrata] gi|297310593|gb|EFH41017.1| hypothetical protein
           ARALYDRAFT_496355 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/137 (41%), Positives = 92/137 (67%)
 Frame = +1

Query: 4   AGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYLSSIH 183
           AGK+++ K + QL+QLVH+L+ IE QVNSH+++I+Q + D R    +F Q+S+ YLSS+H
Sbjct: 138 AGKEILHKHKGQLRQLVHMLKHIETQVNSHREDILQMVDDRRTFFQEFIQKSLYYLSSVH 197

Query: 184 QTGQTNEAFLVASLKLLRATFEHVSSALWSVQDGVENLIGELSKEMCIPLMDYVKDLKAE 363
              + ++ F V ++KLLR  F +++  L SV  GV +L+  L+  MC P+  YV +L AE
Sbjct: 198 --SKNHDTFPV-TVKLLRVLFNNINEMLGSVDSGVNDLMQALAMNMCHPMTKYVGNLAAE 254

Query: 364 MASGALIRLVAMVEEMK 414
           +  G  ++L+ +V EM+
Sbjct: 255 IKHGPCVQLMNVVNEME 271


Top