BLASTX nr result

ID: Coptis25_contig00036245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036245
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334530.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002313768.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]...    68   7e-10
dbj|BAJ88262.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   4e-09
emb|CBI38013.3| unnamed protein product [Vitis vinifera]               65   6e-09

>ref|XP_002334530.1| predicted protein [Populus trichocarpa] gi|222872900|gb|EEF10031.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = +2

Query: 158 IMSLGKTEDGVSQLKEKLYLGMDFGTSGARYALIDKHGNIHSQGKREYP 304
           IM+L   ++    + E+LYLGMDFGTSGARYALIDK G IHS+GKREYP
Sbjct: 48  IMALASNKESGILVGERLYLGMDFGTSGARYALIDKQGIIHSEGKREYP 96


>ref|XP_002313768.1| predicted protein [Populus trichocarpa] gi|222850176|gb|EEE87723.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = +2

Query: 161 MSLGKTEDGVSQLKEKLYLGMDFGTSGARYALIDKHGNIHSQGKREYP 304
           M+L   ++    + E+LYLGMDFGTSGARYALIDK G IHS+GKREYP
Sbjct: 1   MALASNKESGILVGERLYLGMDFGTSGARYALIDKQGIIHSEGKREYP 48


>ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]
           gi|223547984|gb|EEF49476.1| xylulose kinase, putative
           [Ricinus communis]
          Length = 435

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = +2

Query: 203 EKLYLGMDFGTSGARYALIDKHGNIHSQGKREYP 304
           E+LYLGMDFGTSGARYALIDK G+IHS+GKREYP
Sbjct: 14  ERLYLGMDFGTSGARYALIDKQGSIHSEGKREYP 47


>dbj|BAJ88262.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 477

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
 Frame = +2

Query: 53  VPVSQLEMLALLHFPQLNARTEVCKLTNKRKNKKVIMSLGKTED--GVSQLKEKLYLGMD 226
           +P+  L    L   P     + + K  N     ++ +++ K +D  G       LYLG+D
Sbjct: 1   MPILSLSAKPLPRLPANQGLSRLSKRLNLAPTSRIRITMLKQQDRQGNENGSRPLYLGID 60

Query: 227 FGTSGARYALIDKHGNIHSQGKREYPS 307
           FGTSGARYALIDK G IH++GKR YP+
Sbjct: 61  FGTSGARYALIDKQGAIHAEGKRTYPA 87


>emb|CBI38013.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
 Frame = +2

Query: 110 RTEVCKLTNKRKNKKVIMSLGKTEDGV--SQLKEKLYLGMDFGTSGARYALIDKHGNIHS 283
           R ++ K   K K + ++      +DG    Q+  +LYLGMDFGTSGAR+ LIDK G I +
Sbjct: 58  RHQLHKTATKAKARMMMNPGSNKDDGEVSGQVGHRLYLGMDFGTSGARFVLIDKQGTIQA 117

Query: 284 QGKREYPSPHM 316
           QGKREYP  +M
Sbjct: 118 QGKREYPLLYM 128


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