BLASTX nr result
ID: Coptis25_contig00036228
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00036228 (924 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g... 93 8e-17 gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 91 3e-16 emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera] 91 4e-16 ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 90 6e-16 emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera] 89 1e-15 >ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula] Length = 1004 Score = 93.2 bits (230), Expect = 8e-17 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Frame = +3 Query: 54 EFIQGDTWQFSELIIQVL*KLSIDLATIQKPNSSREDTRIWTASTTGEFTILAAHEAIRK 233 ++IQ W + I+ L + + P +ED IW ++ G+ + ++ + Sbjct: 46 DYIQNFRWHIPQTILVHYPALKLLAEKVTIPMEDKEDKLIWNHNSNGDLMMRDSYAFKNQ 105 Query: 234 KATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTDDNLQKRKTQLASRCCICCTHEETLE 413 W K IWS + P + W+L H TD+ LQ+R QL S C +C TH ET Sbjct: 106 PVNTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSF 165 Query: 414 HILYRCALARRVWKYARDIFSIHHELESFNDVQQQGKHFSSLILDMWKACS--------- 566 H+ + C A R+W + F V HF S I D+W C Sbjct: 166 HLFFECCFAFRIWCW-------------FASVLDSSLHFQS-IPDIWSVCDRGWSPQCKV 211 Query: 567 ------LTVMASLWKNRNK 605 + +++++W NRN+ Sbjct: 212 VNQATIVNIISTIWYNRNQ 230 >gb|ABD28730.1| Ribonuclease H [Medicago truncatula] Length = 409 Score = 91.3 bits (225), Expect = 3e-16 Identities = 65/273 (23%), Positives = 109/273 (39%), Gaps = 4/273 (1%) Frame = +3 Query: 45 KLSEFIQGDTWQFSELIIQVL*KLSIDLATIQKPNSSREDTRIWTASTTGEFTILAAHEA 224 K++ ++ W S+ L + I P D IWT S G+ + A Sbjct: 2 KVANYLVNGEWILSDFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSF 61 Query: 225 IRKKATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTDDNLQKRKTQLASRCCICCTHE- 401 + + W K +W++ P I W+ H TDDNL+KR + S CC C + Sbjct: 62 LPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQA 121 Query: 402 ETLEHILYRCALARRVWKYARDIFSIHHELESFNDVQQQGKHF--SSLILDMWKACSLTV 575 ET HI +C + ++W + H + S ++ + +H S+++ MW Sbjct: 122 ETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSILNISRMVQHVMNSAIVHIMW------- 174 Query: 576 MASLWKNRNKVLYDEKASSYSQICYMVRRATIR-AHQQSAGHMENTVHDLKILRSFNLHH 752 S+W N +D S + + +R + +++ D K+ R F++ Sbjct: 175 --SIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSIPF 232 Query: 753 KLRRAPKIFECF*TLPPPGIIKINTDGCSRGNP 851 K R E P G +KIN DG G+P Sbjct: 233 KTNRVNPCREIIWVPPHGGCMKINCDGSVVGSP 265 >emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera] Length = 1566 Score = 90.9 bits (224), Expect = 4e-16 Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 13/179 (7%) Frame = +3 Query: 147 NSSREDTRIWTASTTGEFTILAAHEAIRKK-ATKLTWCKYIWSSKVLPRTQGIAWKLAHG 323 N ED +W AS +G F++ + + + A W + IWS V + AW+ + G Sbjct: 1365 NVGMEDRVVWNASKSGSFSVKSLYNTLDSGGAVPFPW-RIIWSPCVPTKVGFFAWEASWG 1423 Query: 324 AARTDDNLQKRKTQLASRCCICCTHEETLEHILYRCALARRVWKYARDIFSIHHEL---- 491 T D+L++R LA+RC +CC EET+ HIL C A+ +W +F ++ L Sbjct: 1424 KVLTQDHLKRRGWSLANRCFLCCDDEETINHILIHCPKAKVLWNLMFTMFRVNWVLQXTV 1483 Query: 492 --------ESFNDVQQQGKHFSSLILDMWKACSLTVMASLWKNRNKVLYDEKASSYSQI 644 +SF D +++GK +W+A L + ++WK RN++ +D +A S ++ Sbjct: 1484 KDILLGWSDSFVD-KKRGK--------IWRAAPLCLFWTMWKARNRIAFDNEALSIQRL 1533 >ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] gi|355496705|gb|AES77908.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] Length = 666 Score = 90.1 bits (222), Expect = 6e-16 Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 3/228 (1%) Frame = +3 Query: 171 IWTASTTGEFTILAAHEAIRKKATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTDDNLQ 350 I T + G+ T A++ I + + W K++W+S + P I W+L H TD+NL+ Sbjct: 9 ILTHISFGDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLR 68 Query: 351 KRKTQLASRCCICCTHEETLEHILYRCALARRVWKYARDIFSIHHELESFNDVQQQGKHF 530 KR + S CC C E+ +HI + C + R+W + L+ + +Q +++ Sbjct: 69 KRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGK--GTDKLLDCSSCLQLLIRNW 126 Query: 531 ---SSLILDMWKACSLTVMASLWKNRNKVLYDEKASSYSQICYMVRRATIRAHQQSAGHM 701 S L+ ++ + + + S+W RN+ + K + + + ++ + Sbjct: 127 GSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKG 186 Query: 702 ENTVHDLKILRSFNLHHKLRRAPKIFECF*TLPPPGIIKINTDGCSRG 845 + + D K+ + FN+ K++R + P I+KIN DG S G Sbjct: 187 NSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVG 234 >emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera] Length = 1636 Score = 89.4 bits (220), Expect = 1e-15 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 11/185 (5%) Frame = +3 Query: 159 EDTRIWTASTTGEFTILAAHEAIRKKATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTD 338 ED IWTAS G F++ + + + L + IW ++V P+ AW+ + G T Sbjct: 1440 EDRVIWTASKDGAFSVRSLYSMMEPGGLSLFPSERIWRTRVPPKVAFFAWEASWGKVLTQ 1499 Query: 339 DNLQKRKTQLASRCCICCTHEETLEHILYRCALARRVWKYARDIFSIHHELE---SFNDV 509 + LQ+R LA+RC +C + EET++H+L C R +W +F I L + Sbjct: 1500 EQLQRRGFSLANRCFLCLSEEETVDHLLLHCVKTRDLWNLLFSLFGISWTLSCTVKTTLL 1559 Query: 510 QQQGKHFSSLILDMWKACSLTVMASLWKNRNKVLY-DEKAS----SYSQIC---YMVRRA 665 G W+ L + S+WK RN++ + DE S YS +C + VR + Sbjct: 1560 GWNGGFVGKRRKKAWQMAPLCIFWSVWKERNRLAFGDEDLSLQRLKYSFVCNLWFWVRGS 1619 Query: 666 TIRAH 680 +H Sbjct: 1620 LAESH 1624