BLASTX nr result

ID: Coptis25_contig00036228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036228
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    93   8e-17
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    91   3e-16
emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]    91   4e-16
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    90   6e-16
emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]    89   1e-15

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
 Frame = +3

Query: 54  EFIQGDTWQFSELIIQVL*KLSIDLATIQKPNSSREDTRIWTASTTGEFTILAAHEAIRK 233
           ++IQ   W   + I+     L +    +  P   +ED  IW  ++ G+  +  ++    +
Sbjct: 46  DYIQNFRWHIPQTILVHYPALKLLAEKVTIPMEDKEDKLIWNHNSNGDLMMRDSYAFKNQ 105

Query: 234 KATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTDDNLQKRKTQLASRCCICCTHEETLE 413
                 W K IWS  + P    + W+L H    TD+ LQ+R  QL S C +C TH ET  
Sbjct: 106 PVNTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSF 165

Query: 414 HILYRCALARRVWKYARDIFSIHHELESFNDVQQQGKHFSSLILDMWKACS--------- 566
           H+ + C  A R+W +             F  V     HF S I D+W  C          
Sbjct: 166 HLFFECCFAFRIWCW-------------FASVLDSSLHFQS-IPDIWSVCDRGWSPQCKV 211

Query: 567 ------LTVMASLWKNRNK 605
                 + +++++W NRN+
Sbjct: 212 VNQATIVNIISTIWYNRNQ 230


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 65/273 (23%), Positives = 109/273 (39%), Gaps = 4/273 (1%)
 Frame = +3

Query: 45  KLSEFIQGDTWQFSELIIQVL*KLSIDLATIQKPNSSREDTRIWTASTTGEFTILAAHEA 224
           K++ ++    W  S+        L   +  I  P     D  IWT S  G+ +   A   
Sbjct: 2   KVANYLVNGEWILSDFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSF 61

Query: 225 IRKKATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTDDNLQKRKTQLASRCCICCTHE- 401
           +      + W K +W++   P    I W+  H    TDDNL+KR   + S CC  C  + 
Sbjct: 62  LPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQA 121

Query: 402 ETLEHILYRCALARRVWKYARDIFSIHHELESFNDVQQQGKHF--SSLILDMWKACSLTV 575
           ET  HI  +C +  ++W +       H +  S  ++ +  +H   S+++  MW       
Sbjct: 122 ETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSILNISRMVQHVMNSAIVHIMW------- 174

Query: 576 MASLWKNRNKVLYDEKASSYSQICYMVRRATIR-AHQQSAGHMENTVHDLKILRSFNLHH 752
             S+W   N   +D      S +   +    +R +         +++ D K+ R F++  
Sbjct: 175 --SIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSIPF 232

Query: 753 KLRRAPKIFECF*TLPPPGIIKINTDGCSRGNP 851
           K  R     E     P  G +KIN DG   G+P
Sbjct: 233 KTNRVNPCREIIWVPPHGGCMKINCDGSVVGSP 265


>emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]
          Length = 1566

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
 Frame = +3

Query: 147  NSSREDTRIWTASTTGEFTILAAHEAIRKK-ATKLTWCKYIWSSKVLPRTQGIAWKLAHG 323
            N   ED  +W AS +G F++ + +  +    A    W + IWS  V  +    AW+ + G
Sbjct: 1365 NVGMEDRVVWNASKSGSFSVKSLYNTLDSGGAVPFPW-RIIWSPCVPTKVGFFAWEASWG 1423

Query: 324  AARTDDNLQKRKTQLASRCCICCTHEETLEHILYRCALARRVWKYARDIFSIHHEL---- 491
               T D+L++R   LA+RC +CC  EET+ HIL  C  A+ +W     +F ++  L    
Sbjct: 1424 KVLTQDHLKRRGWSLANRCFLCCDDEETINHILIHCPKAKVLWNLMFTMFRVNWVLQXTV 1483

Query: 492  --------ESFNDVQQQGKHFSSLILDMWKACSLTVMASLWKNRNKVLYDEKASSYSQI 644
                    +SF D +++GK        +W+A  L +  ++WK RN++ +D +A S  ++
Sbjct: 1484 KDILLGWSDSFVD-KKRGK--------IWRAAPLCLFWTMWKARNRIAFDNEALSIQRL 1533


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
 Frame = +3

Query: 171 IWTASTTGEFTILAAHEAIRKKATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTDDNLQ 350
           I T  + G+ T   A++ I +    + W K++W+S + P    I W+L H    TD+NL+
Sbjct: 9   ILTHISFGDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLR 68

Query: 351 KRKTQLASRCCICCTHEETLEHILYRCALARRVWKYARDIFSIHHELESFNDVQQQGKHF 530
           KR   + S CC C    E+ +HI + C +  R+W +          L+  + +Q   +++
Sbjct: 69  KRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGK--GTDKLLDCSSCLQLLIRNW 126

Query: 531 ---SSLILDMWKACSLTVMASLWKNRNKVLYDEKASSYSQICYMVRRATIRAHQQSAGHM 701
              S L+ ++  +  +  + S+W  RN+  +  K  + + +  ++      +        
Sbjct: 127 GSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKG 186

Query: 702 ENTVHDLKILRSFNLHHKLRRAPKIFECF*TLPPPGIIKINTDGCSRG 845
            + + D K+ + FN+  K++R     +     P   I+KIN DG S G
Sbjct: 187 NSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVG 234


>emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]
          Length = 1636

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
 Frame = +3

Query: 159  EDTRIWTASTTGEFTILAAHEAIRKKATKLTWCKYIWSSKVLPRTQGIAWKLAHGAARTD 338
            ED  IWTAS  G F++ + +  +      L   + IW ++V P+    AW+ + G   T 
Sbjct: 1440 EDRVIWTASKDGAFSVRSLYSMMEPGGLSLFPSERIWRTRVPPKVAFFAWEASWGKVLTQ 1499

Query: 339  DNLQKRKTQLASRCCICCTHEETLEHILYRCALARRVWKYARDIFSIHHELE---SFNDV 509
            + LQ+R   LA+RC +C + EET++H+L  C   R +W     +F I   L        +
Sbjct: 1500 EQLQRRGFSLANRCFLCLSEEETVDHLLLHCVKTRDLWNLLFSLFGISWTLSCTVKTTLL 1559

Query: 510  QQQGKHFSSLILDMWKACSLTVMASLWKNRNKVLY-DEKAS----SYSQIC---YMVRRA 665
               G          W+   L +  S+WK RN++ + DE  S     YS +C   + VR +
Sbjct: 1560 GWNGGFVGKRRKKAWQMAPLCIFWSVWKERNRLAFGDEDLSLQRLKYSFVCNLWFWVRGS 1619

Query: 666  TIRAH 680
               +H
Sbjct: 1620 LAESH 1624


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