BLASTX nr result

ID: Coptis25_contig00036208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036208
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = -1

Query: 349  FWTMKIPASCSWVWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVAR-- 176
            FWT+K P +CSW W  ILK R++A   ++Y+I DG  T  W D W    PL +S   R  
Sbjct: 1077 FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 1136

Query: 175  HSFALPKDAKVSDILSQGNWSS-MVESISDSSLKNRILNTEVNCYLDKDEVIWTAS 11
            +   + K+AKV+ ++    W +   ++I    +   I +        KDE++W  S
Sbjct: 1137 YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDS 1192


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = -1

Query: 349 FWTMKIPASCSWVWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVAR-- 176
           FWT+K P +CSW W  ILK R++A   ++Y+I DG  T  W D W    PL +S   R  
Sbjct: 22  FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 81

Query: 175 HSFALPKDAKVSDILSQGNWSS-MVESISDSSLKNRILNTEVNCYLDKDEVIWTAS 11
           +   + K+AKV+ ++    W +   ++I    +   I +        KDE++W  S
Sbjct: 82  YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDS 137


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = -1

Query: 349 FWTMKIPASCSWVWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVAR-- 176
           FWT+K P +CSW W  ILK R++A   ++Y+I DG  T  W D W    PL +S   R  
Sbjct: 204 FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 263

Query: 175 HSFALPKDAKVSDILSQGNWSS-MVESISDSSLKNRILNTEVNCYLDKDEVIWTAS 11
           +   + K+AKV+ ++    W +   ++I    +   I +        KDE++W  S
Sbjct: 264 YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDS 319


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = -1

Query: 349  FWTMKIPASCSWVWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVAR-- 176
            FWT+K P +CS  W  ILK R++A   ++Y+I DG  T  W D W    PL +S   R  
Sbjct: 737  FWTIKTPQNCSSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 796

Query: 175  HSFALPKDAKVSDILSQGNWSS-MVESISDSSLKNRILNTEVNCYLDKDEVIWTAS 11
            +   + K+AKV+ ++    W +   ++I    +   I +        KDE+IW  S
Sbjct: 797  YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDS 852


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
 Frame = -1

Query: 364  IKHSFFWTMKIPASCSWVWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESS 185
            +K       KIP++ SW W+ +L+HRN   K +R++I DG D  FW D W    PL    
Sbjct: 906  LKEQNLLVCKIPSNASWQWKNLLRHRNFFSKGLRWLIGDGQDISFWTDNWIFQYPLNSKY 965

Query: 184  VARHSFALPKDAKVSDILS-QGNWS-SMVESISDSSLKNRILNTEVNCYLDKDEVIWTAS 11
            V        ++ KV++  +  G W    + ++   ++   I +  +     +D ++W  +
Sbjct: 966  VPTVG---SENIKVAECFNGLGGWDIPKLLTLVPPNIVKAISSVFIPSSSQQDRLLWGLT 1022

Query: 10   STG 2
             TG
Sbjct: 1023 PTG 1025


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