BLASTX nr result
ID: Coptis25_contig00036206
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00036206 (348 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309754.1| predicted protein [Populus trichocarpa] gi|2... 177 6e-43 ref|XP_002275156.2| PREDICTED: reticulon-like protein B17-like [... 177 1e-42 emb|CBI21893.3| unnamed protein product [Vitis vinifera] 177 1e-42 ref|XP_002328044.1| predicted protein [Populus trichocarpa] gi|2... 170 1e-40 ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [... 169 2e-40 >ref|XP_002309754.1| predicted protein [Populus trichocarpa] gi|222852657|gb|EEE90204.1| predicted protein [Populus trichocarpa] Length = 457 Score = 177 bits (450), Expect = 6e-43 Identities = 85/114 (74%), Positives = 96/114 (84%) Frame = +3 Query: 3 LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182 L I+KTRE+FSG+PS TLK+ PFLL GAEYGHL+TL RLCAIGFFISFT+P+LY CY Q Sbjct: 281 LAISKTRELFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCAIGFFISFTIPKLYACYSSQ 340 Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILR 344 I + E +K + EAWGACSHKKI+AASA T FWNLSSVKTRIFTAFIS VILR Sbjct: 341 IKQKAEQMKNRMFEAWGACSHKKIVAASAVTAFWNLSSVKTRIFTAFISLVILR 394 >ref|XP_002275156.2| PREDICTED: reticulon-like protein B17-like [Vitis vinifera] Length = 429 Score = 177 bits (448), Expect = 1e-42 Identities = 83/115 (72%), Positives = 98/115 (85%) Frame = +3 Query: 3 LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182 L I+KT ++FSG+PS TLK+APF L GAEYGHL+T+ RLCA+GFFISFT+P+LY CY Q Sbjct: 270 LAISKTIQLFSGEPSMTLKVAPFFLVGAEYGHLLTVRRLCALGFFISFTIPKLYSCYSAQ 329 Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILRY 347 I+ VEYLK V EAWGACSHKKI+AASA TVFWNLS++KTRIF AFI+ VILRY Sbjct: 330 INTRVEYLKGWVVEAWGACSHKKIVAASAVTVFWNLSAIKTRIFAAFIALVILRY 384 >emb|CBI21893.3| unnamed protein product [Vitis vinifera] Length = 330 Score = 177 bits (448), Expect = 1e-42 Identities = 83/115 (72%), Positives = 98/115 (85%) Frame = +3 Query: 3 LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182 L I+KT ++FSG+PS TLK+APF L GAEYGHL+T+ RLCA+GFFISFT+P+LY CY Q Sbjct: 171 LAISKTIQLFSGEPSMTLKVAPFFLVGAEYGHLLTVRRLCALGFFISFTIPKLYSCYSAQ 230 Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILRY 347 I+ VEYLK V EAWGACSHKKI+AASA TVFWNLS++KTRIF AFI+ VILRY Sbjct: 231 INTRVEYLKGWVVEAWGACSHKKIVAASAVTVFWNLSAIKTRIFAAFIALVILRY 285 >ref|XP_002328044.1| predicted protein [Populus trichocarpa] gi|222837453|gb|EEE75832.1| predicted protein [Populus trichocarpa] Length = 404 Score = 170 bits (430), Expect = 1e-40 Identities = 81/114 (71%), Positives = 95/114 (83%) Frame = +3 Query: 3 LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182 L I KTR++FSG+PS TLK+ PFLL GAEYGHL+TL RLC IGFFISFT+P+L+ CY Q Sbjct: 251 LAILKTRDLFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCGIGFFISFTIPKLFACYSSQ 310 Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILR 344 I++ VE+LK + EAW AC HKK++AASA T FWNLSSVKTRIFTAFIS VILR Sbjct: 311 INQKVEHLKCRMMEAWRACFHKKMVAASAVTAFWNLSSVKTRIFTAFISLVILR 364 >ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [Glycine max] Length = 430 Score = 169 bits (429), Expect = 2e-40 Identities = 78/113 (69%), Positives = 92/113 (81%) Frame = +3 Query: 9 IAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQIS 188 I+KTRE+FSG+P TLK+APFLL GAEYGHLIT+WRLCAIGFF+SF+VPRLY CY QI+ Sbjct: 269 ISKTRELFSGEPCMTLKVAPFLLLGAEYGHLITIWRLCAIGFFVSFSVPRLYSCYSAQIN 328 Query: 189 RHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILRY 347 VE LK + + W AC+HKKI+ AS FWNLS++KTRIFTAFI VILRY Sbjct: 329 LRVECLKLRLLDTWSACTHKKIVIASVLIAFWNLSTIKTRIFTAFILLVILRY 381