BLASTX nr result

ID: Coptis25_contig00036206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036206
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309754.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_002275156.2| PREDICTED: reticulon-like protein B17-like [...   177   1e-42
emb|CBI21893.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002328044.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [...   169   2e-40

>ref|XP_002309754.1| predicted protein [Populus trichocarpa] gi|222852657|gb|EEE90204.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score =  177 bits (450), Expect = 6e-43
 Identities = 85/114 (74%), Positives = 96/114 (84%)
 Frame = +3

Query: 3   LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182
           L I+KTRE+FSG+PS TLK+ PFLL GAEYGHL+TL RLCAIGFFISFT+P+LY CY  Q
Sbjct: 281 LAISKTRELFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCAIGFFISFTIPKLYACYSSQ 340

Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILR 344
           I +  E +K  + EAWGACSHKKI+AASA T FWNLSSVKTRIFTAFIS VILR
Sbjct: 341 IKQKAEQMKNRMFEAWGACSHKKIVAASAVTAFWNLSSVKTRIFTAFISLVILR 394


>ref|XP_002275156.2| PREDICTED: reticulon-like protein B17-like [Vitis vinifera]
          Length = 429

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/115 (72%), Positives = 98/115 (85%)
 Frame = +3

Query: 3   LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182
           L I+KT ++FSG+PS TLK+APF L GAEYGHL+T+ RLCA+GFFISFT+P+LY CY  Q
Sbjct: 270 LAISKTIQLFSGEPSMTLKVAPFFLVGAEYGHLLTVRRLCALGFFISFTIPKLYSCYSAQ 329

Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILRY 347
           I+  VEYLK  V EAWGACSHKKI+AASA TVFWNLS++KTRIF AFI+ VILRY
Sbjct: 330 INTRVEYLKGWVVEAWGACSHKKIVAASAVTVFWNLSAIKTRIFAAFIALVILRY 384


>emb|CBI21893.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/115 (72%), Positives = 98/115 (85%)
 Frame = +3

Query: 3   LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182
           L I+KT ++FSG+PS TLK+APF L GAEYGHL+T+ RLCA+GFFISFT+P+LY CY  Q
Sbjct: 171 LAISKTIQLFSGEPSMTLKVAPFFLVGAEYGHLLTVRRLCALGFFISFTIPKLYSCYSAQ 230

Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILRY 347
           I+  VEYLK  V EAWGACSHKKI+AASA TVFWNLS++KTRIF AFI+ VILRY
Sbjct: 231 INTRVEYLKGWVVEAWGACSHKKIVAASAVTVFWNLSAIKTRIFAAFIALVILRY 285


>ref|XP_002328044.1| predicted protein [Populus trichocarpa] gi|222837453|gb|EEE75832.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/114 (71%), Positives = 95/114 (83%)
 Frame = +3

Query: 3   LVIAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQ 182
           L I KTR++FSG+PS TLK+ PFLL GAEYGHL+TL RLC IGFFISFT+P+L+ CY  Q
Sbjct: 251 LAILKTRDLFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCGIGFFISFTIPKLFACYSSQ 310

Query: 183 ISRHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILR 344
           I++ VE+LK  + EAW AC HKK++AASA T FWNLSSVKTRIFTAFIS VILR
Sbjct: 311 INQKVEHLKCRMMEAWRACFHKKMVAASAVTAFWNLSSVKTRIFTAFISLVILR 364


>ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 430

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/113 (69%), Positives = 92/113 (81%)
 Frame = +3

Query: 9   IAKTREIFSGDPSTTLKLAPFLLFGAEYGHLITLWRLCAIGFFISFTVPRLYRCYLVQIS 188
           I+KTRE+FSG+P  TLK+APFLL GAEYGHLIT+WRLCAIGFF+SF+VPRLY CY  QI+
Sbjct: 269 ISKTRELFSGEPCMTLKVAPFLLLGAEYGHLITIWRLCAIGFFVSFSVPRLYSCYSAQIN 328

Query: 189 RHVEYLKTSVCEAWGACSHKKIIAASAATVFWNLSSVKTRIFTAFISTVILRY 347
             VE LK  + + W AC+HKKI+ AS    FWNLS++KTRIFTAFI  VILRY
Sbjct: 329 LRVECLKLRLLDTWSACTHKKIVIASVLIAFWNLSTIKTRIFTAFILLVILRY 381


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