BLASTX nr result

ID: Coptis25_contig00036192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036192
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15676.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002283867.1| PREDICTED: UDP-arabinopyranose mutase 1 [Vit...    60   2e-07
gb|AFK42305.1| unknown [Lotus japonicus]                               59   4e-07
gb|AFK40119.1| unknown [Lotus japonicus]                               59   4e-07
gb|AFK39536.1| unknown [Lotus japonicus]                               59   4e-07

>emb|CBI15676.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +1

Query: 208 SKQVKEKLGPIDNYFEKLADSMVTWIEVWEEIS 306
           SKQVKEKLG +D YF+KLADSMVTWIE WEE++
Sbjct: 284 SKQVKEKLGHVDPYFQKLADSMVTWIEAWEELN 316


>ref|XP_002283867.1| PREDICTED: UDP-arabinopyranose mutase 1 [Vitis vinifera]
          Length = 370

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +1

Query: 208 SKQVKEKLGPIDNYFEKLADSMVTWIEVWEEIS 306
           SKQVKEKLG +D YF+KLADSMVTWIE WEE++
Sbjct: 314 SKQVKEKLGHVDPYFQKLADSMVTWIEAWEELN 346


>gb|AFK42305.1| unknown [Lotus japonicus]
          Length = 270

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 208 SKQVKEKLGPIDNYFEKLADSMVTWIEVWEEIS 306
           SKQVKEKLGP+D YF KL D+MVTWIE W+E++
Sbjct: 222 SKQVKEKLGPVDPYFNKLGDAMVTWIEAWDELN 254


>gb|AFK40119.1| unknown [Lotus japonicus]
          Length = 360

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 208 SKQVKEKLGPIDNYFEKLADSMVTWIEVWEEIS 306
           SKQVKEKLGP+D YF KL D+MVTWIE W+E++
Sbjct: 312 SKQVKEKLGPVDPYFNKLGDAMVTWIEAWDELN 344


>gb|AFK39536.1| unknown [Lotus japonicus]
          Length = 139

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 208 SKQVKEKLGPIDNYFEKLADSMVTWIEVWEEIS 306
           SKQVKEKLGP+D YF KL D+MVTWIE W+E++
Sbjct: 91  SKQVKEKLGPVDPYFNKLGDAMVTWIEAWDELN 123


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