BLASTX nr result

ID: Coptis25_contig00036173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036173
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34572.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002280885.1| PREDICTED: early nodulin-like protein 1 [Vit...   121   7e-26
ref|XP_002297953.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_004146129.1| PREDICTED: early nodulin-like protein 1-like...   107   1e-21
ref|XP_002518894.1| Stellacyanin, putative [Ricinus communis] gi...   104   6e-21

>emb|CBI34572.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/91 (65%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   AFQICNLKDPILYMKDGNSLFNITTPGKYFFSSGEPGHCEKSQKLAISVLTGDG-SAFSP 179
           +F  CNL DPILYM +GNSLFNIT+ G+++F+S  PGHCEK QKL ISVL+G+G SAFSP
Sbjct: 64  SFNACNLTDPILYMNNGNSLFNITSLGEFYFTSAVPGHCEKKQKLQISVLSGNGSSAFSP 123

Query: 180 SYGPSILPDTAPSYQNAFGSIPSTSSSMPLQ 272
           SYGPS LPD+  SY   FGSIP+ +SS P Q
Sbjct: 124 SYGPSALPDS--SYPTVFGSIPAANSSSPSQ 152


>ref|XP_002280885.1| PREDICTED: early nodulin-like protein 1 [Vitis vinifera]
           gi|147827006|emb|CAN62283.1| hypothetical protein
           VITISV_034699 [Vitis vinifera]
          Length = 192

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/91 (65%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   AFQICNLKDPILYMKDGNSLFNITTPGKYFFSSGEPGHCEKSQKLAISVLTGDG-SAFSP 179
           +F  CNL DPILYM +GNSLFNIT+ G+++F+S  PGHCEK QKL ISVL+G+G SAFSP
Sbjct: 82  SFNACNLTDPILYMNNGNSLFNITSLGEFYFTSAVPGHCEKKQKLQISVLSGNGSSAFSP 141

Query: 180 SYGPSILPDTAPSYQNAFGSIPSTSSSMPLQ 272
           SYGPS LPD+  SY   FGSIP+ +SS P Q
Sbjct: 142 SYGPSALPDS--SYPTVFGSIPAANSSSPSQ 170


>ref|XP_002297953.1| predicted protein [Populus trichocarpa] gi|222845211|gb|EEE82758.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/86 (63%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6   FQICNLKDPILYMKDGNSLFNITTPGKYFFSSGEPGHCEKSQKLAISVL-TGDGSAFSPS 182
           +  CNL DPILYM +GNSLFNIT  G ++F+SG  GHC+K QKL ISV   G  SA+SPS
Sbjct: 83  YNSCNLTDPILYMNNGNSLFNITAYGDFYFTSGVQGHCQKKQKLHISVPGNGSASAYSPS 142

Query: 183 YGPSILPDTAPSYQNAFGSIPSTSSS 260
           YGPS LPD+APSY   FGSIP   SS
Sbjct: 143 YGPSALPDSAPSYPTVFGSIPLPPSS 168


>ref|XP_004146129.1| PREDICTED: early nodulin-like protein 1-like [Cucumis sativus]
           gi|449495019|ref|XP_004159711.1| PREDICTED: early
           nodulin-like protein 1-like [Cucumis sativus]
          Length = 199

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/86 (59%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   AFQICNLKDPILYMKDGNSLFNITTPGKYFFSSGEPGHCEKSQKLAISVLTGDGSAFSPS 182
           ++  CNLKDPILYMKDGNSLFNIT  G  FF SG+ GHCEK+QKL ISVL+G+GS+ S  
Sbjct: 81  SYNSCNLKDPILYMKDGNSLFNITDYGDLFFISGDAGHCEKNQKLHISVLSGNGSSASAP 140

Query: 183 YGPSILPDTAPSYQNAFGSIPSTSSS 260
                LP+ +PSY   FG IP+  S+
Sbjct: 141 SSDGSLPEISPSYPTVFGGIPAAPSA 166


>ref|XP_002518894.1| Stellacyanin, putative [Ricinus communis]
           gi|223541881|gb|EEF43427.1| Stellacyanin, putative
           [Ricinus communis]
          Length = 194

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/95 (60%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = +3

Query: 6   FQICNLKDPILYMKDGNSLFNITTPGKYFFSSGEPGHCEKSQKLAISVLTGDGSAFSPSY 185
           +  CNL DP+LYMK+GNSLFNIT  G ++F+SG PGHCEK QKL ISV  G+ S  SPS 
Sbjct: 83  YNSCNLTDPVLYMKNGNSLFNITANGHFYFTSGVPGHCEKKQKLHISV--GNDSDISPSN 140

Query: 186 GPSILPDT--APSYQNAFGSIP-STSSSMPLQVFS 281
           G S LPDT  APSY   FG+IP   S+S P   FS
Sbjct: 141 GSSALPDTAAAPSYPTNFGTIPLPPSASSPTYRFS 175


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