BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036171
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   159   1e-44
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   152   5e-44
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   140   9e-42
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   140   1e-41
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   132   2e-40

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  159 bits (401), Expect(2) = 1e-44
 Identities = 71/132 (53%), Positives = 99/132 (75%)
 Frame = +1

Query: 4   ISKVISNRIKLVINDIVQANQSAFIPGRSIQDNILLSHEILRGYDRKHGTPRCSIKLDIR 183
           ISK+++NR+K +I ++V   QS FIPGR I DNILL+ E++RGY RKH +PRC +K+DIR
Sbjct: 527 ISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIR 586

Query: 184 KAFDMVSWESIKAMLKQFNFPANMCKWIELCISTPTYSVLINGTPEGYFEGRRGLRQGDP 363
           KA+D V W  ++ +L +F FP+    WI  C+ST +YSVL+NG P   F+ R+GLRQGDP
Sbjct: 587 KAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDP 646

Query: 364 LSPYLFVLVMKF 399
           +SP+LF L M++
Sbjct: 647 MSPFLFALCMEY 658



 Score = 46.6 bits (109), Expect(2) = 1e-44
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +3

Query: 441 SYHSKCRKVKLSHLAFADDVLMFCKGERDSIQAIKECLDDFGSATRL 581
           ++H KC ++ ++HL FADD+LMFC+ ++ S+  +      F  A+ L
Sbjct: 673 NFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGL 719


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  152 bits (385), Expect(2) = 5e-44
 Identities = 67/132 (50%), Positives = 99/132 (75%)
 Frame = +1

Query: 4   ISKVISNRIKLVINDIVQANQSAFIPGRSIQDNILLSHEILRGYDRKHGTPRCSIKLDIR 183
           ISK+++ R++ VI ++V   Q+ FIP R I DNILL+ E++RGY+R+H +PRC IK+DIR
Sbjct: 530 ISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIR 589

Query: 184 KAFDMVSWESIKAMLKQFNFPANMCKWIELCISTPTYSVLINGTPEGYFEGRRGLRQGDP 363
           KA+D V W  +++MLK+  FP+   +WI  C+ T +YS+L+NG P   F+ ++GLRQGDP
Sbjct: 590 KAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDP 649

Query: 364 LSPYLFVLVMKF 399
           LSP+LF L M++
Sbjct: 650 LSPFLFALSMEY 661



 Score = 50.8 bits (120), Expect(2) = 5e-44
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +3

Query: 441 SYHSKCRKVKLSHLAFADDVLMFCKGERDSIQAIKECLDDFGSATRLQ 584
           ++H KC ++KL+HL FADD+LMF + +  SI  I    + F  A+ LQ
Sbjct: 676 NFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQ 723


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  140 bits (353), Expect(2) = 9e-42
 Identities = 62/138 (44%), Positives = 99/138 (71%)
 Frame = +1

Query: 4   ISKVISNRIKLVINDIVQANQSAFIPGRSIQDNILLSHEILRGYDRKHGTPRCSIKLDIR 183
           I+K++++R+K ++N+++  +QSAF+PGR + +N+LL+ EI+ GY+ K+ + R  +K+D+R
Sbjct: 537 IAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLR 596

Query: 184 KAFDMVSWESIKAMLKQFNFPANMCKWIELCISTPTYSVLINGTPEGYFEGRRGLRQGDP 363
           KAFD V W+ I +  +    P     WI  CISTP +SV++NG+  G+F+  +GLRQGDP
Sbjct: 597 KAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDP 656

Query: 364 LSPYLFVLVMKFWVVFLQ 417
           LSPYLFVL M+ +   L+
Sbjct: 657 LSPYLFVLAMEVFSSLLK 674



 Score = 55.5 bits (132), Expect(2) = 9e-42
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +3

Query: 393 EILGCVLTRSIDNRSISYHSKCRKVKLSHLAFADDVLMFCKGERDSIQAIKECLDDFGSA 572
           E+   +L    D   I YH K   + +SHL FADDV++F  G   S+  I E LDDF S 
Sbjct: 667 EVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASW 726

Query: 573 TRLQIN 590
           + L +N
Sbjct: 727 SGLHVN 732


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  140 bits (353), Expect(2) = 1e-41
 Identities = 62/138 (44%), Positives = 99/138 (71%)
 Frame = +1

Query: 4   ISKVISNRIKLVINDIVQANQSAFIPGRSIQDNILLSHEILRGYDRKHGTPRCSIKLDIR 183
           I+K++++R+K ++N+++  +QSAF+PGR + +N+LL+ EI+ GY+ K+ + R  +K+D+R
Sbjct: 537 IAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLR 596

Query: 184 KAFDMVSWESIKAMLKQFNFPANMCKWIELCISTPTYSVLINGTPEGYFEGRRGLRQGDP 363
           KAFD V W+ I +  +    P     WI  CISTP +SV++NG+  G+F+  +GLRQGDP
Sbjct: 597 KAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDP 656

Query: 364 LSPYLFVLVMKFWVVFLQ 417
           LSPYLFVL M+ +   L+
Sbjct: 657 LSPYLFVLAMEVFSSLLK 674



 Score = 55.1 bits (131), Expect(2) = 1e-41
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = +3

Query: 393 EILGCVLTRSIDNRSISYHSKCRKVKLSHLAFADDVLMFCKGERDSIQAIKECLDDFGSA 572
           E+   +L    D   I YH K   + +SHL FADDV++F  G   S+  I E LDDF S 
Sbjct: 667 EVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASW 726

Query: 573 TRLQIN 590
           + L +N
Sbjct: 727 SGLHVN 732


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  132 bits (331), Expect(2) = 2e-40
 Identities = 56/132 (42%), Positives = 94/132 (71%)
 Frame = +1

Query: 4    ISKVISNRIKLVINDIVQANQSAFIPGRSIQDNILLSHEILRGYDRKHGTPRCSIKLDIR 183
            I+K+I+ R+  ++  I+  +Q+AF+PG++I ++ILL++E+L GY RK GTPR  ++LD+ 
Sbjct: 851  IAKIITERLGKILPSIISHSQAAFVPGQNIHNHILLAYELLNGYGRKGGTPRVMMQLDLH 910

Query: 184  KAFDMVSWESIKAMLKQFNFPANMCKWIELCISTPTYSVLINGTPEGYFEGRRGLRQGDP 363
            KA+DMV+W +++ +LK+   P     WI   +ST +Y   +NGT     + +RG+RQGDP
Sbjct: 911  KAYDMVNWRAMECILKEIGLPMQFVSWIMTGVSTVSYRFNVNGTYYDIMQAKRGIRQGDP 970

Query: 364  LSPYLFVLVMKF 399
            +SP LFV++M++
Sbjct: 971  MSPMLFVIIMEY 982



 Score = 59.3 bits (142), Expect(2) = 2e-40
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +3

Query: 393  EILGCVLTRSIDNRSISYHSKCRKVKLSHLAFADDVLMFCKGERDSIQAIKECLDDFGSA 572
            E L   L +   N   ++HSKC K+ L++L FADDVL+FC+G+  S+  + E +  F  +
Sbjct: 981  EYLHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDS 1040

Query: 573  TRLQIN 590
            T L++N
Sbjct: 1041 TGLKVN 1046