BLASTX nr result

ID: Coptis25_contig00036166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036166
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|2235415...    88   6e-16
ref|XP_002316018.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|NP_001043127.1| Os01g0499300 [Oryza sativa Japonica Group] g...    87   2e-15
ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase...    87   2e-15
gb|EEE54641.1| hypothetical protein OsJ_01913 [Oryza sativa Japo...    87   2e-15

>ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|223541503|gb|EEF43052.1| amsh,
           putative [Ricinus communis]
          Length = 456

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 INIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3
           IN++ + RKV VDNRIPL +YYRIADNLL+QANI+REEKN+VDLYIILLRFS
Sbjct: 3   INVNEIARKVEVDNRIPLRYYYRIADNLLRQANIHREEKNIVDLYIILLRFS 54


>ref|XP_002316018.1| predicted protein [Populus trichocarpa] gi|222865058|gb|EEF02189.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = -3

Query: 158 INIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRF 6
           IN+D MTRKV VDNRIPL  YYRIADNLL+QANI+REEKN+VDLYI+LLR+
Sbjct: 3   INVDKMTRKVEVDNRIPLRNYYRIADNLLRQANIHREEKNVVDLYIMLLRY 53


>ref|NP_001043127.1| Os01g0499300 [Oryza sativa Japonica Group]
           gi|56202279|dbj|BAD73720.1| STAM binding protein-like
           protein [Oryza sativa Japonica Group]
           gi|113532658|dbj|BAF05041.1| Os01g0499300 [Oryza sativa
           Japonica Group] gi|215734959|dbj|BAG95681.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 518

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = -3

Query: 182 SSETTMKAINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3
           SS   M  INI+AM R V VD+RI + +Y+RIADNLL+QANIYREEKNLVDLYIILLR+S
Sbjct: 5   SSRQAMGEINIEAMARPVSVDHRISIAYYFRIADNLLRQANIYREEKNLVDLYIILLRYS 64


>ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase 3-like [Vitis
           vinifera]
          Length = 459

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/54 (70%), Positives = 50/54 (92%)
 Frame = -3

Query: 164 KAINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3
           +  N++++TR+V VD+RIPL +YYRIADNL+KQA++YREEKNL+DLYIILLRFS
Sbjct: 6   RPFNVNSITRRVDVDDRIPLRYYYRIADNLIKQASVYREEKNLIDLYIILLRFS 59


>gb|EEE54641.1| hypothetical protein OsJ_01913 [Oryza sativa Japonica Group]
          Length = 536

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = -3

Query: 182 SSETTMKAINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3
           SS   M  INI+AM R V VD+RI + +Y+RIADNLL+QANIYREEKNLVDLYIILLR+S
Sbjct: 5   SSRQAMGEINIEAMARPVSVDHRISIAYYFRIADNLLRQANIYREEKNLVDLYIILLRYS 64


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