BLASTX nr result
ID: Coptis25_contig00036166
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00036166 (220 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|2235415... 88 6e-16 ref|XP_002316018.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 ref|NP_001043127.1| Os01g0499300 [Oryza sativa Japonica Group] g... 87 2e-15 ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase... 87 2e-15 gb|EEE54641.1| hypothetical protein OsJ_01913 [Oryza sativa Japo... 87 2e-15 >ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|223541503|gb|EEF43052.1| amsh, putative [Ricinus communis] Length = 456 Score = 88.2 bits (217), Expect = 6e-16 Identities = 41/52 (78%), Positives = 48/52 (92%) Frame = -3 Query: 158 INIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3 IN++ + RKV VDNRIPL +YYRIADNLL+QANI+REEKN+VDLYIILLRFS Sbjct: 3 INVNEIARKVEVDNRIPLRYYYRIADNLLRQANIHREEKNIVDLYIILLRFS 54 >ref|XP_002316018.1| predicted protein [Populus trichocarpa] gi|222865058|gb|EEF02189.1| predicted protein [Populus trichocarpa] Length = 470 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/51 (80%), Positives = 47/51 (92%) Frame = -3 Query: 158 INIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRF 6 IN+D MTRKV VDNRIPL YYRIADNLL+QANI+REEKN+VDLYI+LLR+ Sbjct: 3 INVDKMTRKVEVDNRIPLRNYYRIADNLLRQANIHREEKNVVDLYIMLLRY 53 >ref|NP_001043127.1| Os01g0499300 [Oryza sativa Japonica Group] gi|56202279|dbj|BAD73720.1| STAM binding protein-like protein [Oryza sativa Japonica Group] gi|113532658|dbj|BAF05041.1| Os01g0499300 [Oryza sativa Japonica Group] gi|215734959|dbj|BAG95681.1| unnamed protein product [Oryza sativa Japonica Group] Length = 518 Score = 86.7 bits (213), Expect = 2e-15 Identities = 43/60 (71%), Positives = 50/60 (83%) Frame = -3 Query: 182 SSETTMKAINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3 SS M INI+AM R V VD+RI + +Y+RIADNLL+QANIYREEKNLVDLYIILLR+S Sbjct: 5 SSRQAMGEINIEAMARPVSVDHRISIAYYFRIADNLLRQANIYREEKNLVDLYIILLRYS 64 >ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase 3-like [Vitis vinifera] Length = 459 Score = 86.7 bits (213), Expect = 2e-15 Identities = 38/54 (70%), Positives = 50/54 (92%) Frame = -3 Query: 164 KAINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3 + N++++TR+V VD+RIPL +YYRIADNL+KQA++YREEKNL+DLYIILLRFS Sbjct: 6 RPFNVNSITRRVDVDDRIPLRYYYRIADNLIKQASVYREEKNLIDLYIILLRFS 59 >gb|EEE54641.1| hypothetical protein OsJ_01913 [Oryza sativa Japonica Group] Length = 536 Score = 86.7 bits (213), Expect = 2e-15 Identities = 43/60 (71%), Positives = 50/60 (83%) Frame = -3 Query: 182 SSETTMKAINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFS 3 SS M INI+AM R V VD+RI + +Y+RIADNLL+QANIYREEKNLVDLYIILLR+S Sbjct: 5 SSRQAMGEINIEAMARPVSVDHRISIAYYFRIADNLLRQANIYREEKNLVDLYIILLRYS 64