BLASTX nr result

ID: Coptis25_contig00036148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036148
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|2...    80   9e-15
ref|XP_002299858.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-11
ref|XP_002324170.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-11
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]    61   1e-10
ref|XP_002525486.1| conserved hypothetical protein [Ricinus comm...    62   1e-07

>ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|222847563|gb|EEE85110.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 79.7 bits (195), Expect(2) = 9e-15
 Identities = 39/107 (36%), Positives = 62/107 (57%)
 Frame = -1

Query: 497 TTQNRCDLETYQAWTKTDRRVCYIMLSKMHDDLIGEYETFSTAKDIWDQLKFAFXXXXXX 318
           T Q+R D+E YQ + + DR    +MLS M +D++  +E   + + +WD +K  +      
Sbjct: 9   TAQHRLDMEAYQTYKRKDRVARILMLSSMRNDIMLRFERHRSTQSVWDAVKIQYGGTSTT 68

Query: 317 XXXXLVLKFEMFRKDPKATMPEHIRVLSSMIRELKAAGNVLTDEQQV 177
               L LKF+ ++K    TM +H+ V+S+MI ELK   + +TDEQQV
Sbjct: 69  RLRQLTLKFDGYKKCQNQTMRQHLTVMSNMISELKGVEHEMTDEQQV 115



 Score = 26.6 bits (57), Expect(2) = 9e-15
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 61  MTHNESIKNFSDIS*HCDLE 2
           + HN++IK F D++ H +LE
Sbjct: 133 LIHNDNIKTFDDVAHHVELE 152


>ref|XP_002299858.1| predicted protein [Populus trichocarpa] gi|222847116|gb|EEE84663.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 67.0 bits (162), Expect(2) = 2e-11
 Identities = 33/101 (32%), Positives = 57/101 (56%)
 Frame = -1

Query: 479 DLETYQAWTKTDRRVCYIMLSKMHDDLIGEYETFSTAKDIWDQLKFAFXXXXXXXXXXLV 300
           D+ETYQ +   D     +MLS M +D++  +E   + +  WD +K  +          L+
Sbjct: 3   DMETYQTYKCKDHVARILMLSSMRNDIMLRFERHRSIQAAWDAIKIQYGETSTTRLCQLI 62

Query: 299 LKFEMFRKDPKATMPEHIRVLSSMIRELKAAGNVLTDEQQV 177
           LKF+ ++K    TM ++  ++S++I EL+ A + +TDEQQV
Sbjct: 63  LKFDGYKKHQNQTMRQYFIIMSNLINELRGAEHEMTDEQQV 103



 Score = 27.7 bits (60), Expect(2) = 2e-11
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 61  MTHNESIKNFSDIS*HCDLE 2
           +THN++IK F D++ H +LE
Sbjct: 121 LTHNDNIKIFDDVARHVELE 140


>ref|XP_002324170.1| predicted protein [Populus trichocarpa] gi|222865604|gb|EEF02735.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 36/105 (34%), Positives = 61/105 (58%)
 Frame = -1

Query: 491 QNRCDLETYQAWTKTDRRVCYIMLSKMHDDLIGEYETFSTAKDIWDQLKFAFXXXXXXXX 312
           Q+  D+E YQ   + DR    +ML  M +D++  +E   +A+ +WD +K  +        
Sbjct: 11  QHMLDMEAYQTHKRKDRVARILMLRSMSNDIMLCFERHRSAQSVWDAVKIQYGGTSTTRF 70

Query: 311 XXLVLKFEMFRKDPKATMPEHIRVLSSMIRELKAAGNVLTDEQQV 177
             L LKF+ ++K    TM +++ ++S+MI ELK AG+ +TDEQQ+
Sbjct: 71  RQLTLKFDGYKKHQNQTMRQYLTIMSNMISELKGAGHEMTDEQQI 115


>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
          Length = 1842

 Score = 60.8 bits (146), Expect(2) = 1e-10
 Identities = 43/122 (35%), Positives = 56/122 (45%)
 Frame = -1

Query: 542 LGTLNHFDGPT*NWGTTQNRCDLETYQAWTKTDRRVCYIMLSKMHDDLIGEYETFSTAKD 363
           L TLNH         + Q+R D ETY AW K +      +LS M DDL+ E E + TA +
Sbjct: 165 LXTLNHIMQEPEQGNSAQHRKDQETYVAWKKKNSLARITLLSCMQDDLLIEREVYQTAHE 224

Query: 362 IWDQLKFAFXXXXXXXXXXLVLKFEMFRKDPKATMPEHIRVLSSMIRELKAAGNVLTDEQ 183
           +W  LK  +                       AT    +  +  MIRELK + +VLTDEQ
Sbjct: 225 MWKALKEKYGGL-------------------SATKLRELE-MKRMIRELKTSRHVLTDEQ 264

Query: 182 QV 177
           QV
Sbjct: 265 QV 266



 Score = 31.2 bits (69), Expect(2) = 1e-10
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 61  MTHNESIKNFSDIS*HCDLE 2
           MTHNES+K F DI  H +LE
Sbjct: 284 MTHNESVKTFDDIVHHLELE 303


>ref|XP_002525486.1| conserved hypothetical protein [Ricinus communis]
           gi|223535223|gb|EEF36901.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/81 (38%), Positives = 51/81 (62%)
 Frame = -1

Query: 428 IMLSKMHDDLIGEYETFSTAKDIWDQLKFAFXXXXXXXXXXLVLKFEMFRKDPKATMPEH 249
           I++S M++DL+ EY+ + T+  +W  L+  F          L +KF+ F+K P  +M +H
Sbjct: 28  ILISFMNNDLVYEYQQYPTSHAMWVALREKFGGTTVSKLKQLTIKFDTFKKVPNKSMKQH 87

Query: 248 IRVLSSMIRELKAAGNVLTDE 186
           +R +S+MI ELK+A +VL DE
Sbjct: 88  LRDMSNMIMELKSARHVLIDE 108


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