BLASTX nr result

ID: Coptis25_contig00036142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036142
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]         219   3e-55
ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vi...   218   6e-55
ref|XP_004161490.1| PREDICTED: squamosa promoter-binding-like pr...   198   8e-49
ref|XP_004136576.1| PREDICTED: squamosa promoter-binding-like pr...   198   8e-49
ref|XP_003553428.1| PREDICTED: squamosa promoter-binding-like pr...   197   1e-48

>gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]
          Length = 378

 Score =  219 bits (558), Expect = 3e-55
 Identities = 106/142 (74%), Positives = 115/142 (80%), Gaps = 2/142 (1%)
 Frame = -2

Query: 421 LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGGAPVISKK--GRGVLQGGQPPRCQV 248
           LKFG+KIYFED+G+G  A   +  SS+  A  GG   P   KK  G GV+QGGQPPRCQV
Sbjct: 24  LKFGQKIYFEDLGVGAPAKSGTGSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPPRCQV 83

Query: 247 EGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRR 68
           EGCK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSCRR
Sbjct: 84  EGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSCRR 143

Query: 67  RLAGHNERRRKPQPGSLFTSRY 2
           RLAGHNERRRKP PGSL +SRY
Sbjct: 144 RLAGHNERRRKPPPGSLLSSRY 165


>ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vitis vinifera]
          Length = 379

 Score =  218 bits (556), Expect = 6e-55
 Identities = 107/144 (74%), Positives = 117/144 (81%), Gaps = 4/144 (2%)
 Frame = -2

Query: 421 LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGG----APVISKKGRGVLQGGQPPRC 254
           LKFG+KIYFED+G+G  A K   GSS+  +  G GG    AP    +G GV+QGGQPPRC
Sbjct: 24  LKFGQKIYFEDLGVGAPA-KSGTGSSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPPRC 82

Query: 253 QVEGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSC 74
           QVEGCK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSC
Sbjct: 83  QVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSC 142

Query: 73  RRRLAGHNERRRKPQPGSLFTSRY 2
           RRRLAGHNERRRKP PGSL +SRY
Sbjct: 143 RRRLAGHNERRRKPPPGSLLSSRY 166


>ref|XP_004161490.1| PREDICTED: squamosa promoter-binding-like protein 17-like [Cucumis
           sativus]
          Length = 382

 Score =  198 bits (503), Expect = 8e-49
 Identities = 100/142 (70%), Positives = 113/142 (79%), Gaps = 2/142 (1%)
 Frame = -2

Query: 421 LKFGKKIYFEDVGIGV--SANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQV 248
           LKFG+KIYFEDVGIG    +   S  SSAV+A+      P    +G GV+Q  QPPRCQV
Sbjct: 30  LKFGQKIYFEDVGIGELPKSGGGSFSSSAVIAS-----TPTKKPRG-GVVQAAQPPRCQV 83

Query: 247 EGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRR 68
           EGC++DL+D KAYYSRHKVC MHSK+P+VIV GLEQRFCQQCSRFH L EFDQGKRSCRR
Sbjct: 84  EGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRR 143

Query: 67  RLAGHNERRRKPQPGSLFTSRY 2
           RLAGHNERRRKP PGSL ++RY
Sbjct: 144 RLAGHNERRRKPPPGSLLSTRY 165


>ref|XP_004136576.1| PREDICTED: squamosa promoter-binding-like protein 17-like [Cucumis
           sativus]
          Length = 382

 Score =  198 bits (503), Expect = 8e-49
 Identities = 100/142 (70%), Positives = 113/142 (79%), Gaps = 2/142 (1%)
 Frame = -2

Query: 421 LKFGKKIYFEDVGIGV--SANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQV 248
           LKFG+KIYFEDVGIG    +   S  SSAV+A+      P    +G GV+Q  QPPRCQV
Sbjct: 30  LKFGQKIYFEDVGIGELPKSGGGSFSSSAVIAS-----TPTKKPRG-GVVQAAQPPRCQV 83

Query: 247 EGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRR 68
           EGC++DL+D KAYYSRHKVC MHSK+P+VIV GLEQRFCQQCSRFH L EFDQGKRSCRR
Sbjct: 84  EGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRR 143

Query: 67  RLAGHNERRRKPQPGSLFTSRY 2
           RLAGHNERRRKP PGSL ++RY
Sbjct: 144 RLAGHNERRRKPPPGSLLSTRY 165


>ref|XP_003553428.1| PREDICTED: squamosa promoter-binding-like protein 9-like [Glycine
           max]
          Length = 359

 Score =  197 bits (501), Expect = 1e-48
 Identities = 101/144 (70%), Positives = 108/144 (75%), Gaps = 4/144 (2%)
 Frame = -2

Query: 421 LKFGKKIYFEDVGIGVSANK---PSDGSSAVLATEGGGGAPVISKKGRG-VLQGGQPPRC 254
           LKFG+KIYFEDVG+   A      S  SSA   T         S+KGRG  +Q  QPPRC
Sbjct: 16  LKFGQKIYFEDVGLATPATSLTSSSSSSSAATVTSSSS-----SRKGRGGSVQPAQPPRC 70

Query: 253 QVEGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSC 74
           QVEGCK+DLSD KAYYSRHKVCGMHSK+P VIV GL+QRFCQQCSRFH L EFDQGKRSC
Sbjct: 71  QVEGCKVDLSDAKAYYSRHKVCGMHSKSPSVIVAGLQQRFCQQCSRFHQLPEFDQGKRSC 130

Query: 73  RRRLAGHNERRRKPQPGSLFTSRY 2
           RRRLAGHNERRRKP   SL TSRY
Sbjct: 131 RRRLAGHNERRRKPPTSSLLTSRY 154


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