BLASTX nr result

ID: Coptis25_contig00036138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036138
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263839.2| PREDICTED: uncharacterized protein LOC100249...   223   1e-56
ref|XP_002301816.1| predicted protein [Populus trichocarpa] gi|2...   218   3e-55
emb|CBI18742.3| unnamed protein product [Vitis vinifera]              217   7e-55
ref|XP_003626886.1| hypothetical protein MTR_8g011610 [Medicago ...   214   8e-54
ref|XP_002533059.1| hypothetical protein RCOM_0318150 [Ricinus c...   209   2e-52

>ref|XP_002263839.2| PREDICTED: uncharacterized protein LOC100249686 [Vitis vinifera]
           gi|147835480|emb|CAN72820.1| hypothetical protein
           VITISV_012037 [Vitis vinifera]
          Length = 477

 Score =  223 bits (569), Expect = 1e-56
 Identities = 100/138 (72%), Positives = 120/138 (86%)
 Frame = +3

Query: 18  FLGVEQFAQFPNLQQWLGLAIAGAVELGHIVETPIIRTATSIVPLGWSGAPGGKNGEPLK 197
           FLG+EQ  QFPNLQQWLGL++AG VELGHIVE+P+IRTATSIVPLGWSG PG KNGEPLK
Sbjct: 41  FLGMEQMQQFPNLQQWLGLSVAGTVELGHIVESPVIRTATSIVPLGWSGVPGEKNGEPLK 100

Query: 198 IDITGYGLHLCSLVQAQLNGNWCSTTVESLPSMPTFSSNHELQPDMQKMRILVGAPVRNQ 377
           +DITG+GLHLCS+VQAQ+NGNWC+TTVES P  P +SSNH LQPD+Q++R+LVGAP++  
Sbjct: 101 VDITGFGLHLCSVVQAQVNGNWCATTVESFPPTPAYSSNHGLQPDLQRIRVLVGAPLKRP 160

Query: 378 GKHQIVNESLMPTFPNID 431
            KHQIV + + P F +ID
Sbjct: 161 PKHQIVTDPVTPMFSSID 178


>ref|XP_002301816.1| predicted protein [Populus trichocarpa] gi|222843542|gb|EEE81089.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  218 bits (556), Expect = 3e-55
 Identities = 100/141 (70%), Positives = 119/141 (84%)
 Frame = +3

Query: 9   SSPFLGVEQFAQFPNLQQWLGLAIAGAVELGHIVETPIIRTATSIVPLGWSGAPGGKNGE 188
           +S FLG+EQ  QFPNLQQWLGLA+AGAVEL HIV+ P+IRTATSIVPLGWSG P  KNGE
Sbjct: 5   TSSFLGIEQLPQFPNLQQWLGLAVAGAVELAHIVDLPVIRTATSIVPLGWSGIPDDKNGE 64

Query: 189 PLKIDITGYGLHLCSLVQAQLNGNWCSTTVESLPSMPTFSSNHELQPDMQKMRILVGAPV 368
           PLK+DITG+ LHLC+LV AQ+NGNWCSTTVES PS P++ SN+  QP++QK+R+LVGAP+
Sbjct: 65  PLKVDITGFRLHLCNLVHAQVNGNWCSTTVESFPSAPSYYSNNGSQPELQKIRVLVGAPL 124

Query: 369 RNQGKHQIVNESLMPTFPNID 431
           R   KH IV +S MP FP+ID
Sbjct: 125 RRPPKHPIVTDSFMPVFPSID 145


>emb|CBI18742.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  217 bits (553), Expect = 7e-55
 Identities = 97/135 (71%), Positives = 117/135 (86%)
 Frame = +3

Query: 27  VEQFAQFPNLQQWLGLAIAGAVELGHIVETPIIRTATSIVPLGWSGAPGGKNGEPLKIDI 206
           +EQ  QFPNLQQWLGL++AG VELGHIVE+P+IRTATSIVPLGWSG PG KNGEPLK+DI
Sbjct: 1   MEQMQQFPNLQQWLGLSVAGTVELGHIVESPVIRTATSIVPLGWSGVPGEKNGEPLKVDI 60

Query: 207 TGYGLHLCSLVQAQLNGNWCSTTVESLPSMPTFSSNHELQPDMQKMRILVGAPVRNQGKH 386
           TG+GLHLCS+VQAQ+NGNWC+TTVES P  P +SSNH LQPD+Q++R+LVGAP++   KH
Sbjct: 61  TGFGLHLCSVVQAQVNGNWCATTVESFPPTPAYSSNHGLQPDLQRIRVLVGAPLKRPPKH 120

Query: 387 QIVNESLMPTFPNID 431
           QIV + + P F +ID
Sbjct: 121 QIVTDPVTPMFSSID 135


>ref|XP_003626886.1| hypothetical protein MTR_8g011610 [Medicago truncatula]
            gi|355520908|gb|AET01362.1| hypothetical protein
            MTR_8g011610 [Medicago truncatula]
          Length = 1070

 Score =  214 bits (544), Expect = 8e-54
 Identities = 99/147 (67%), Positives = 120/147 (81%)
 Frame = +3

Query: 9    SSPFLGVEQFAQFPNLQQWLGLAIAGAVELGHIVETPIIRTATSIVPLGWSGAPGGKNGE 188
            +S FLG+EQ+ Q  +LQQWLGLA A  VELGHIVE+P IRTATSIVPLGW+G PG KNGE
Sbjct: 586  ASSFLGIEQWQQASHLQQWLGLAAADTVELGHIVESPTIRTATSIVPLGWNGVPGAKNGE 645

Query: 189  PLKIDITGYGLHLCSLVQAQLNGNWCSTTVESLPSMPTFSSNHELQPDMQKMRILVGAPV 368
            PLK+DITG+GLHLC+LV AQ+NG+WCSTTVES PS P +SSN E+QP++QKMR+LVGAP 
Sbjct: 646  PLKVDITGFGLHLCTLVHAQVNGDWCSTTVESFPSAPNYSSNQEIQPELQKMRVLVGAPQ 705

Query: 369  RNQGKHQIVNESLMPTFPNIDMGNSSS 449
            +   KHQ V +SLMP F ++D   + S
Sbjct: 706  KTPPKHQTVLDSLMPVFTSVDSMTAGS 732


>ref|XP_002533059.1| hypothetical protein RCOM_0318150 [Ricinus communis]
           gi|223527157|gb|EEF29329.1| hypothetical protein
           RCOM_0318150 [Ricinus communis]
          Length = 945

 Score =  209 bits (532), Expect = 2e-52
 Identities = 95/140 (67%), Positives = 118/140 (84%)
 Frame = +3

Query: 12  SPFLGVEQFAQFPNLQQWLGLAIAGAVELGHIVETPIIRTATSIVPLGWSGAPGGKNGEP 191
           SPF G+EQ  QFP+LQQWLGLA+AGAVEL  IVE P+IRTATSI+PLGWSG    KNGEP
Sbjct: 540 SPFPGMEQLPQFPHLQQWLGLAVAGAVELAQIVELPVIRTATSILPLGWSGVSNEKNGEP 599

Query: 192 LKIDITGYGLHLCSLVQAQLNGNWCSTTVESLPSMPTFSSNHELQPDMQKMRILVGAPVR 371
           LK+DITG+GLHLC+LV A++NGNWCST VES PS+P++SS+ E+ P++QK+R+LVG P+R
Sbjct: 600 LKVDITGFGLHLCNLVHARVNGNWCSTRVESFPSVPSYSSSQEVHPELQKIRVLVGGPLR 659

Query: 372 NQGKHQIVNESLMPTFPNID 431
              KH IV +SLMP FP+I+
Sbjct: 660 RPPKHPIVADSLMPVFPSIN 679


Top