BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036128
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   171   5e-41
ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   146   2e-33
ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus ...   144   1e-32
ref|XP_003519790.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   142   3e-32
ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   137   7e-31

>ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 601

 Score =  171 bits (434), Expect = 5e-41
 Identities = 93/176 (52%), Positives = 118/176 (67%), Gaps = 2/176 (1%)
 Frame = +3

Query: 3   RILFPDHVLLLVSKDDHSLLGVDCIYRIQGELSNASDEELALPVLSMDEYNDLESIIRCP 182
           R+LFPDHVLL+VS  +     ++C+Y  +     A+++ +  PVLS+DE ++L  + RCP
Sbjct: 90  RVLFPDHVLLMVSHINDRSEVLECVY-CKDIGVEAANKLIVRPVLSVDELDELRWVARCP 148

Query: 183 LPPANYSAIVNLRR--RAKRSVGEDTGSLLVDRAVHSWESLVYGAVLDGETAVVFVKGLN 356
           LPP NYSA VNLRR  R +  V  D     V   VHSWE + Y A LD ++AVVFVKGLN
Sbjct: 149 LPPQNYSAEVNLRRPPRKESIVDGDEWLRRVHPTVHSWEMMAYAAALDRDSAVVFVKGLN 208

Query: 357 LRADRVSDATQFSCHFGWDSAERSTKYVLATRAITAAQEVVRCLLPRSLRMLPARA 524
           LR DR SD  QFSCHFG    ER  K+ L TRA +AAQEV+RC LPRS+RM P++A
Sbjct: 209 LRPDRESDPRQFSCHFGTGDRERGGKFALTTRAFSAAQEVIRCSLPRSIRMNPSKA 264


>ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 605

 Score =  146 bits (368), Expect = 2e-33
 Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 14/188 (7%)
 Frame = +3

Query: 3   RILFPDHVLLLVS---KDDHSLLGVDCIY-RIQGELSNASDEELAL-----PVLSMDEYN 155
           RILFPDH LL+++   +    L  ++C+Y  +    S++   E  L     PVLS D Y+
Sbjct: 88  RILFPDHHLLILTNPQQQQQKLHELECVYYTLHPNASSSGSPEPVLEVQVRPVLSTDRYD 147

Query: 156 DLESIIRCPLPPANYSA-----IVNLRRRAKRSVGEDTGSLLVDRAVHSWESLVYGAVLD 320
           +  SI+RCPLP  N SA      V+LRRR +  VG  +  +L+++   SW+ + Y A LD
Sbjct: 148 ESRSIVRCPLPQTNSSAGGGPKAVDLRRRGE--VGRRSLGILMNQTAQSWDRVAYEATLD 205

Query: 321 GETAVVFVKGLNLRADRVSDATQFSCHFGWDSAERSTKYVLATRAITAAQEVVRCLLPRS 500
           G+T VVFVKGLNLR  ++SD T+  CHFG  S  +   ++L TRA++ AQEVVRC+LP+S
Sbjct: 206 GDTVVVFVKGLNLRPHKISDPTRIRCHFGLKSFHKDNAFLLTTRAVSVAQEVVRCMLPQS 265

Query: 501 LRMLPARA 524
           +R  P +A
Sbjct: 266 IRNDPDKA 273


>ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|325530317|sp|B9S2H4.1|Y232_RICCO RecName:
           Full=UPF0392 protein RCOM_0530710
           gi|223540685|gb|EEF42248.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 578

 Score =  144 bits (362), Expect = 1e-32
 Identities = 81/174 (46%), Positives = 109/174 (62%)
 Frame = +3

Query: 3   RILFPDHVLLLVSKDDHSLLGVDCIYRIQGELSNASDEELALPVLSMDEYNDLESIIRCP 182
           R+L PDHVLL+VS    +   +DC+Y     L N+ D  L  P LS+++Y+  +SI+RC 
Sbjct: 87  RVLLPDHVLLIVSNKVATSQNLDCVY---SNLYNSHDVVLK-PALSVNQYHRDKSIVRCQ 142

Query: 183 LPPANYSAIVNLRRRAKRSVGEDTGSLLVDRAVHSWESLVYGAVLDGETAVVFVKGLNLR 362
           LPP NYSA V LR   + + G    +     +V SW+ +VY A+LD  T  VFVKGLNLR
Sbjct: 143 LPPNNYSAAVYLRWSWEAAEGVAAAA---PASVVSWDRVVYEAMLDWNTVAVFVKGLNLR 199

Query: 363 ADRVSDATQFSCHFGWDSAERSTKYVLATRAITAAQEVVRCLLPRSLRMLPARA 524
             + SD+++F CHFG    ++    V  T AITAAQEV+RCLLPRS+R  P +A
Sbjct: 200 PHKESDSSKFRCHFGLSKFDKDEGIVFTTEAITAAQEVIRCLLPRSIRNNPVKA 253


>ref|XP_003519790.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 605

 Score =  142 bits (358), Expect = 3e-32
 Identities = 79/186 (42%), Positives = 114/186 (61%), Gaps = 12/186 (6%)
 Frame = +3

Query: 3   RILFPDHVLLLVSKDDHSLLG-VDCIY-RIQGELSNASDEELAL-----PVLSMDEYNDL 161
           RILFPDH LL+++      L  ++C+Y  +    S++   E        PVLS D Y++ 
Sbjct: 90  RILFPDHHLLIITNPQQQKLHELECVYYTLHPNASSSGSPEPVFQVHVRPVLSTDRYDES 149

Query: 162 ESIIRCPLPPANYSA-----IVNLRRRAKRSVGEDTGSLLVDRAVHSWESLVYGAVLDGE 326
            SI+RCPL   N SA      V++RRR +  VG     +L+++   SW+ + Y A LDG+
Sbjct: 150 RSIVRCPLTQTNSSAGDASKAVDMRRRGE--VGHRNLGVLMNQTAQSWDRVAYEATLDGD 207

Query: 327 TAVVFVKGLNLRADRVSDATQFSCHFGWDSAERSTKYVLATRAITAAQEVVRCLLPRSLR 506
           T VVFVKGLNLR  ++SD T+  CHFG  S ++   ++L TRA++ AQEVVRC+LP+S+R
Sbjct: 208 TVVVFVKGLNLRPHKISDPTRIRCHFGLKSFDKDNAFLLTTRAVSVAQEVVRCMLPQSMR 267

Query: 507 MLPARA 524
             P +A
Sbjct: 268 NNPDKA 273


>ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
          Length = 598

 Score =  137 bits (346), Expect = 7e-31
 Identities = 81/170 (47%), Positives = 108/170 (63%), Gaps = 3/170 (1%)
 Frame = +3

Query: 3   RILFPDHVLLLVSKDDHSLLGVDCIYRIQGELSNASDEE-LALPVLSMDEYNDLESIIRC 179
           R+LFPDH+LL+VS +      +DC+Y     ++  SD E L   VLS D+Y++  SI RC
Sbjct: 93  RVLFPDHLLLMVSGEFGRDEKLDCLYH--KSVARGSDRETLKQSVLSTDKYDEFRSIARC 150

Query: 180 PLPPANYSA-IVNLRRRAKRSVGEDTGSLLVDR-AVHSWESLVYGAVLDGETAVVFVKGL 353
           PLPP NYSA  V+LRR     V  D   L+ +R  V SWE +VY A +DG T VVF KGL
Sbjct: 151 PLPPLNYSASAVDLRRGG---VEADDHWLVRNRHPVASWERVVYEAAIDGNTVVVFAKGL 207

Query: 354 NLRADRVSDATQFSCHFGWDSAERSTKYVLATRAITAAQEVVRCLLPRSL 503
           NLR  R S+  +FSCHF   ++  + +YV  T+A+ AAQE++RC LP S+
Sbjct: 208 NLRPHRESNPAEFSCHFRLGNSNNNGEYVHTTKAVAAAQEIIRCSLPASV 257