BLASTX nr result

ID: Coptis25_contig00036118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036118
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38649.1| unknown [Lotus japonicus]                               74   9e-12
ref|XP_002282273.2| PREDICTED: uncharacterized protein LOC100250...    74   1e-11
ref|XP_003574747.1| PREDICTED: uncharacterized protein LOC100821...    73   3e-11
ref|XP_002864051.1| hypothetical protein ARALYDRAFT_495088 [Arab...    71   8e-11
gb|AAV63934.1| hypothetical protein At5g50290 [Arabidopsis thali...    71   8e-11

>gb|AFK38649.1| unknown [Lotus japonicus]
          Length = 103

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = -1

Query: 116 CRSYCGNLTVDFPFTTRSGCGHHGFRDLLFCINNVLML 3
           CR+YCGN+TVD+PF T+ GCGH GFRDLLFCIN+VLML
Sbjct: 35  CRTYCGNITVDYPFATQYGCGHPGFRDLLFCINDVLML 72


>ref|XP_002282273.2| PREDICTED: uncharacterized protein LOC100250137 [Vitis vinifera]
          Length = 306

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = -1

Query: 116 CRSYCGNLTVDFPFTTRSGCGHHGFRDLLFCINNVLM 6
           CRSYCGN+T+D+PF  RSGCGH GFRDLLFC+N+VLM
Sbjct: 34  CRSYCGNITIDYPFALRSGCGHPGFRDLLFCMNDVLM 70


>ref|XP_003574747.1| PREDICTED: uncharacterized protein LOC100821126 [Brachypodium
           distachyon]
          Length = 315

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -1

Query: 116 CRSYCGNLTVDFPFTTRSGCGHHGFRDLLFCINNVLML 3
           CRS+CGN+TVD+PF  RSGCGH G RDLLFCIN VLML
Sbjct: 35  CRSFCGNITVDYPFALRSGCGHAGLRDLLFCINRVLML 72


>ref|XP_002864051.1| hypothetical protein ARALYDRAFT_495088 [Arabidopsis lyrata subsp.
           lyrata] gi|297309886|gb|EFH40310.1| hypothetical protein
           ARALYDRAFT_495088 [Arabidopsis lyrata subsp. lyrata]
          Length = 303

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = -1

Query: 116 CRSYCGNLTVDFPFTTRSGCGHHGFRDLLFCINNVLM 6
           CRSYCGN+TVD+PF  R+GCGH G+RDLLFC+N+VLM
Sbjct: 22  CRSYCGNITVDYPFGIRNGCGHPGYRDLLFCMNDVLM 58


>gb|AAV63934.1| hypothetical protein At5g50290 [Arabidopsis thaliana]
          Length = 303

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = -1

Query: 116 CRSYCGNLTVDFPFTTRSGCGHHGFRDLLFCINNVLM 6
           CRSYCGN+TVD+PF  R+GCGH G+RDLLFC+N+VLM
Sbjct: 22  CRSYCGNITVDYPFGIRNGCGHPGYRDLLFCMNDVLM 58


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