BLASTX nr result

ID: Coptis25_contig00036092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036092
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330551.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002523183.1| protein binding protein, putative [Ricinus c...    67   2e-09
ref|XP_004158073.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR...    65   4e-09
ref|XP_004135545.1| PREDICTED: probable LRR receptor-like serine...    65   4e-09
ref|XP_003535094.1| PREDICTED: probable LRR receptor-like serine...    64   1e-08

>ref|XP_002330551.1| predicted protein [Populus trichocarpa] gi|222872109|gb|EEF09240.1|
           predicted protein [Populus trichocarpa]
          Length = 1056

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/76 (48%), Positives = 43/76 (56%)
 Frame = -2

Query: 230 VLTQYPKLKVLDLSFXXXXXXXXXXXXXXXXXXXXXXENNLLTGAIKFSPPSPNEPNLMV 51
           V+TQYPKL+VLDLS                       ENNLL GAI+FSPPS  + NL V
Sbjct: 442 VITQYPKLRVLDLSSNQLDGSLLTELLMSPTLQEIHLENNLLNGAIEFSPPSTTQSNLQV 501

Query: 50  LDLSHNRFSGDFPAEF 3
           +DLSHN+  G FP  F
Sbjct: 502 IDLSHNQLDGFFPGRF 517


>ref|XP_002523183.1| protein binding protein, putative [Ricinus communis]
           gi|223537590|gb|EEF39214.1| protein binding protein,
           putative [Ricinus communis]
          Length = 1060

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/73 (49%), Positives = 42/73 (57%)
 Frame = -2

Query: 221 QYPKLKVLDLSFXXXXXXXXXXXXXXXXXXXXXXENNLLTGAIKFSPPSPNEPNLMVLDL 42
           QYPKL+VLD+S                       ENNLL GAI+FSPPS NE NL+V+DL
Sbjct: 449 QYPKLQVLDMSSNQLDGPLLTDFLTLPTLQELHLENNLLNGAIEFSPPSNNESNLLVIDL 508

Query: 41  SHNRFSGDFPAEF 3
           SHN+  G FP  F
Sbjct: 509 SHNQLDGYFPDRF 521


>ref|XP_004158073.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At4g20940-like [Cucumis
           sativus]
          Length = 1061

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/77 (46%), Positives = 43/77 (55%)
 Frame = -2

Query: 233 AVLTQYPKLKVLDLSFXXXXXXXXXXXXXXXXXXXXXXENNLLTGAIKFSPPSPNEPNLM 54
           + +T+YPKL+VLDLS                       ENNLL GA+KF  PSP + NL 
Sbjct: 448 SAITKYPKLRVLDLSSNQFDGPLLADLLTMSTLEELYLENNLLNGAVKFLLPSPGKANLE 507

Query: 53  VLDLSHNRFSGDFPAEF 3
           VLDLSHN+  G FP EF
Sbjct: 508 VLDLSHNQLDGYFPDEF 524


>ref|XP_004135545.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like [Cucumis sativus]
          Length = 1061

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/77 (46%), Positives = 43/77 (55%)
 Frame = -2

Query: 233 AVLTQYPKLKVLDLSFXXXXXXXXXXXXXXXXXXXXXXENNLLTGAIKFSPPSPNEPNLM 54
           + +T+YPKL+VLDLS                       ENNLL GA+KF  PSP + NL 
Sbjct: 448 SAITKYPKLRVLDLSSNQFDGPLLADLLTMSTLEELYLENNLLNGAVKFLLPSPGKANLE 507

Query: 53  VLDLSHNRFSGDFPAEF 3
           VLDLSHN+  G FP EF
Sbjct: 508 VLDLSHNQLDGYFPDEF 524


>ref|XP_003535094.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g20940-like [Glycine max]
          Length = 1062

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/76 (46%), Positives = 46/76 (60%)
 Frame = -2

Query: 230 VLTQYPKLKVLDLSFXXXXXXXXXXXXXXXXXXXXXXENNLLTGAIKFSPPSPNEPNLMV 51
           VLTQYPKL+VLD+SF                      ENN+++G IKFS  SP++ +L +
Sbjct: 449 VLTQYPKLRVLDISFNQLDGLLPANLLTLPTLQELRLENNMISGGIKFSS-SPDQSDLQI 507

Query: 50  LDLSHNRFSGDFPAEF 3
           LDLSHN+ +G FP EF
Sbjct: 508 LDLSHNQLNGYFPDEF 523


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