BLASTX nr result

ID: Coptis25_contig00036088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036088
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    67   1e-09
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...    67   1e-09
gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japo...    67   1e-09
gb|EEC66781.1| hypothetical protein OsI_33174 [Oryza sativa Indi...    67   1e-09
gb|AAP53215.2| retrotransposon protein, putative, unclassified, ...    67   1e-09

>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 145  LGYKGPKFTWSNQRKIKDHILERLDRALANDNWLMLFPNMQVNTFATASSDHLSMMITLN 324
            +GY GP +TWSN+++ KD +LERLDR LAN  W   +PN  V       SDH  ++  LN
Sbjct: 944  MGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILN 1003

Query: 325  KDNNTVKQAKLFQ 363
              N   K++ +F+
Sbjct: 1004 PKNRRPKRSFMFE 1016


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 145 LGYKGPKFTWSNQRKIKDHILERLDRALANDNWLMLFPNMQVNTFATASSDHLSMMITLN 324
           +GY GP +TWSN+++ KD +LERLDR LAN  W   +PN  V       SDH  ++  LN
Sbjct: 168 MGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILN 227

Query: 325 KDNNTVKQAKLFQ 363
             N   K++ +F+
Sbjct: 228 PKNRRPKRSFMFE 240


>gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japonica Group]
          Length = 881

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 145 LGYKGPKFTWSNQRKIKDHILERLDRALANDNWLMLFPNMQVNTFATASSDHLSMMITLN 324
           +GY GP +TWSN+++ KD +LERLDR LAN  W   +PN  V       SDH  ++  LN
Sbjct: 32  MGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILN 91

Query: 325 KDNNTVKQAKLFQ 363
             N   K++ +F+
Sbjct: 92  PKNRRPKRSFMFE 104


>gb|EEC66781.1| hypothetical protein OsI_33174 [Oryza sativa Indica Group]
          Length = 1144

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 145 LGYKGPKFTWSNQRKIKDHILERLDRALANDNWLMLFPNMQVNTFATASSDHLSMMITLN 324
           +GY GP +TWSN+++ KD +LERLDR LAN  W   +PN  V       SDH  ++  LN
Sbjct: 714 MGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILN 773

Query: 325 KDNNTVKQAKLFQ 363
             N   K++ +F+
Sbjct: 774 PKNRRPKRSFMFE 786


>gb|AAP53215.2| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1701

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 145  LGYKGPKFTWSNQRKIKDHILERLDRALANDNWLMLFPNMQVNTFATASSDHLSMMITLN 324
            +GY GP +TWSN+++ KD +LERLDR LAN  W   +PN  V       SDH  ++  LN
Sbjct: 944  MGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILN 1003

Query: 325  KDNNTVKQAKLFQ 363
              N   K++ +F+
Sbjct: 1004 PKNRRPKRSFMFE 1016


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