BLASTX nr result
ID: Coptis25_contig00036076
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00036076 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nuc... 99 5e-19 ref|XP_003618133.1| Guanine nucleotide-exchange protein-like pro... 97 1e-18 ref|XP_003519699.1| PREDICTED: brefeldin A-inhibited guanine nuc... 96 4e-18 ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nuc... 96 4e-18 emb|CBI37718.3| unnamed protein product [Vitis vinifera] 96 4e-18 >ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] Length = 1714 Score = 98.6 bits (244), Expect = 5e-19 Identities = 45/67 (67%), Positives = 57/67 (85%) Frame = -2 Query: 203 GGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQICAKAVLA 24 GGL +E IEL +L++L+S+VRSP + IRA CL QI++TCYNVY G +GTNQICAK+VLA Sbjct: 129 GGLGEEAIELGVLRVLLSAVRSPCILIRADCLIQIVRTCYNVYLGGVNGTNQICAKSVLA 188 Query: 23 QILTIVF 3 QI+TIVF Sbjct: 189 QIMTIVF 195 >ref|XP_003618133.1| Guanine nucleotide-exchange protein-like protein [Medicago truncatula] gi|355519468|gb|AET01092.1| Guanine nucleotide-exchange protein-like protein [Medicago truncatula] Length = 697 Score = 97.1 bits (240), Expect = 1e-18 Identities = 45/67 (67%), Positives = 56/67 (83%) Frame = -2 Query: 203 GGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQICAKAVLA 24 GGL +E IEL +L++L+S+VRSP V IR CL QI++TCYNVY G +GTNQICAK+VLA Sbjct: 126 GGLGEEAIELGVLRVLLSAVRSPCVLIRGDCLVQIVRTCYNVYLGGVNGTNQICAKSVLA 185 Query: 23 QILTIVF 3 QI+TIVF Sbjct: 186 QIVTIVF 192 >ref|XP_003519699.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 2 [Glycine max] Length = 1732 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/67 (65%), Positives = 56/67 (83%) Frame = -2 Query: 203 GGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQICAKAVLA 24 GGL ++ IEL +L++L+S+VRSP V IRA CL QI++TCYNVY G +GTNQICAK+VLA Sbjct: 136 GGLGEDAIELGVLRVLLSAVRSPCVLIRADCLIQIVRTCYNVYLGGVNGTNQICAKSVLA 195 Query: 23 QILTIVF 3 QI+ IVF Sbjct: 196 QIMIIVF 202 >ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 1 [Glycine max] Length = 1721 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/67 (65%), Positives = 56/67 (83%) Frame = -2 Query: 203 GGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQICAKAVLA 24 GGL ++ IEL +L++L+S+VRSP V IRA CL QI++TCYNVY G +GTNQICAK+VLA Sbjct: 136 GGLGEDAIELGVLRVLLSAVRSPCVLIRADCLIQIVRTCYNVYLGGVNGTNQICAKSVLA 195 Query: 23 QILTIVF 3 QI+ IVF Sbjct: 196 QIMIIVF 202 >emb|CBI37718.3| unnamed protein product [Vitis vinifera] Length = 1611 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/66 (66%), Positives = 56/66 (84%) Frame = -2 Query: 200 GLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQICAKAVLAQ 21 G ++ ++LA+LK+L+S+VRSP V+IR +CL I+KTCYNVY GS SGTNQICAKAVLAQ Sbjct: 75 GSGEDAVDLAVLKVLLSAVRSPCVYIRGECLVHIVKTCYNVYLGSVSGTNQICAKAVLAQ 134 Query: 20 ILTIVF 3 I+ IVF Sbjct: 135 IMLIVF 140