BLASTX nr result

ID: Coptis25_contig00036052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036052
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305194.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_002333987.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252...   203   1e-50
ref|XP_002304895.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
emb|CAN79616.1| hypothetical protein VITISV_004977 [Vitis vinifera]   201   7e-50

>ref|XP_002305194.1| predicted protein [Populus trichocarpa] gi|222848158|gb|EEE85705.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/149 (68%), Positives = 116/149 (77%), Gaps = 4/149 (2%)
 Frame = +1

Query: 4   WSHATFNHPSTFHTLAMDEEKKKDITDDLTTFSEGKDYYKKIGKAWKRGYLLYGPPGTGK 183
           WSH  F HP+TF TLAM+ +KK++I  DLT FS+GKDYY KIGKAWKRGYLLYGPPGTGK
Sbjct: 195 WSHVVFEHPATFDTLAMETKKKEEIKKDLTKFSKGKDYYAKIGKAWKRGYLLYGPPGTGK 254

Query: 184 STMIAAIANYLDYDIYDLELTTVNNNTELRKLLIETSNKSVIVIEDIDCSLDLTGQR--- 354
           STMI+A+AN LDYDIYDLELTTV +N+ELRKLLIET+ KS+IVIEDIDCSLDLTGQR   
Sbjct: 255 STMISAMANLLDYDIYDLELTTVKDNSELRKLLIETTGKSIIVIEDIDCSLDLTGQRKKT 314

Query: 355 -XXXXXXXXXXXXDPISKKKKESSTNEDS 438
                        DP+SKKKKE+     S
Sbjct: 315 KEKDDDDQSDKEKDPVSKKKKEAEEERKS 343


>ref|XP_002333987.1| predicted protein [Populus trichocarpa] gi|222839463|gb|EEE77800.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score =  203 bits (517), Expect = 1e-50
 Identities = 101/149 (67%), Positives = 115/149 (77%), Gaps = 4/149 (2%)
 Frame = +1

Query: 4   WSHATFNHPSTFHTLAMDEEKKKDITDDLTTFSEGKDYYKKIGKAWKRGYLLYGPPGTGK 183
           WSH  F HP+TF TLAM+ +KK++I  DLT FS+GKDYY KIGKAWKRGYLLYGPPGTGK
Sbjct: 195 WSHVVFEHPATFDTLAMETKKKEEIKKDLTKFSKGKDYYAKIGKAWKRGYLLYGPPGTGK 254

Query: 184 STMIAAIANYLDYDIYDLELTTVNNNTELRKLLIETSNKSVIVIEDIDCSLDLTGQR--- 354
           STMI+A+AN L YDIYDLELTTV +N+ELRKLLIET+ KS+IVIEDIDCSLDLTGQR   
Sbjct: 255 STMISAMANLLGYDIYDLELTTVKDNSELRKLLIETTGKSIIVIEDIDCSLDLTGQRKKT 314

Query: 355 -XXXXXXXXXXXXDPISKKKKESSTNEDS 438
                        DP+SKKKKE+     S
Sbjct: 315 KEKDDDDQSDKEKDPVSKKKKEAEEERKS 343


>ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252565 [Vitis vinifera]
          Length = 520

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/144 (68%), Positives = 112/144 (77%)
 Frame = +1

Query: 1   VWSHATFNHPSTFHTLAMDEEKKKDITDDLTTFSEGKDYYKKIGKAWKRGYLLYGPPGTG 180
           +WSH  F HP+ F TLAM+ +KK++I +DLT FS  K+YY KIGKAWKRGYLLYGPPGTG
Sbjct: 196 LWSHVAFEHPARFETLAMEPKKKEEIVNDLTIFSRRKEYYSKIGKAWKRGYLLYGPPGTG 255

Query: 181 KSTMIAAIANYLDYDIYDLELTTVNNNTELRKLLIETSNKSVIVIEDIDCSLDLTGQRXX 360
           KSTMIAA+AN LDYDIYDLELT+V +NTELR LLIET NKS+IVIEDIDCSLDLTGQR  
Sbjct: 256 KSTMIAAMANLLDYDIYDLELTSVKSNTELRMLLIETRNKSIIVIEDIDCSLDLTGQRKK 315

Query: 361 XXXXXXXXXXDPISKKKKESSTNE 432
                     DPI K +KE  + E
Sbjct: 316 KKETNEEEKKDPIRKMEKEGESKE 339


>ref|XP_002304895.1| predicted protein [Populus trichocarpa] gi|222847859|gb|EEE85406.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  202 bits (514), Expect = 2e-50
 Identities = 101/149 (67%), Positives = 113/149 (75%), Gaps = 3/149 (2%)
 Frame = +1

Query: 4   WSHATFNHPSTFHTLAMDEEKKKDITDDLTTFSEGKDYYKKIGKAWKRGYLLYGPPGTGK 183
           W +  F HPSTF TLAMD  KK++I  DL  FS+GKDYY KIGKAWKRGYLLYGPPGTGK
Sbjct: 194 WGNIVFEHPSTFDTLAMDTAKKEEIKKDLIKFSKGKDYYAKIGKAWKRGYLLYGPPGTGK 253

Query: 184 STMIAAIANYLDYDIYDLELTTVNNNTELRKLLIETSNKSVIVIEDIDCSLDLTGQ---R 354
           S+MIAA+AN LDYD+YDLELTT+ +N+ELRKLLIET  KS+IVIEDIDCSLDLTGQ   R
Sbjct: 254 SSMIAAMANLLDYDVYDLELTTIKDNSELRKLLIETKGKSIIVIEDIDCSLDLTGQRKKR 313

Query: 355 XXXXXXXXXXXXDPISKKKKESSTNEDSK 441
                       DPISKKKKE+     SK
Sbjct: 314 KEKDDDEADKEKDPISKKKKEAEEESGSK 342


>emb|CAN79616.1| hypothetical protein VITISV_004977 [Vitis vinifera]
          Length = 512

 Score =  201 bits (510), Expect = 7e-50
 Identities = 97/147 (65%), Positives = 113/147 (76%)
 Frame = +1

Query: 1   VWSHATFNHPSTFHTLAMDEEKKKDITDDLTTFSEGKDYYKKIGKAWKRGYLLYGPPGTG 180
           +WSH  F HP+TF T+A++ EKK+DI DDL TFS+ KDYY +IGK WKRGYLLYGPPGTG
Sbjct: 219 MWSHVAFEHPATFETIALEPEKKQDIIDDLLTFSKSKDYYARIGKVWKRGYLLYGPPGTG 278

Query: 181 KSTMIAAIANYLDYDIYDLELTTVNNNTELRKLLIETSNKSVIVIEDIDCSLDLTGQRXX 360
           KSTMIAA+AN L YD+YDLELT V +NTELRKLLIET+NKS+IVIEDIDCSLDLTGQR  
Sbjct: 279 KSTMIAAMANLLSYDVYDLELTAVKDNTELRKLLIETTNKSIIVIEDIDCSLDLTGQRK- 337

Query: 361 XXXXXXXXXXDPISKKKKESSTNEDSK 441
                         K++K S + ED K
Sbjct: 338 -------------KKEEKSSESQEDEK 351


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