BLASTX nr result

ID: Coptis25_contig00036046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036046
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltrans...   166   5e-39
gb|ABF69946.1| FtsJ-like methyltransferase family protein [Musa ...   165   8e-39
ref|XP_004163010.1| PREDICTED: adoMet-dependent rRNA methyltrans...   164   1e-38
ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltrans...   164   1e-38
ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltrans...   164   1e-38

>ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 834

 Score =  166 bits (419), Expect = 5e-39
 Identities = 93/166 (56%), Positives = 110/166 (66%)
 Frame = -1

Query: 661  EEDDDGKAEMLACAXXXXXXXXXXXIEDDAYNKYMFDDKELPTFFLDYEKRHRQPIKPVT 482
            EED + KAE+LA A           + DDAYNKYMFDD+ LP +FLD E+RHRQPIKP+T
Sbjct: 630  EEDIEAKAEILAYAKKMMRKKQREHLLDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPIT 689

Query: 481  KEEIAAVKAQFKEIDACPXXXXXXXXXXXXXXAMRKLDKVRKKANTISDQTDINERSKMK 302
            KEEIAA+KAQFKEIDA P              AMRKL+KVRKKAN ISDQT+I++RSK K
Sbjct: 690  KEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQTEISDRSKRK 749

Query: 301  LINQLYKKAMPKKPRKEYXXXXXXXXXXXXXXXXXXVDRRLKKDMR 164
             I QLYK+A+PK+P+KEY                  VDRR+KKD R
Sbjct: 750  QIEQLYKRAVPKRPKKEY-VVAKKGVQVRAGKGKVLVDRRMKKDAR 794


>gb|ABF69946.1| FtsJ-like methyltransferase family protein [Musa acuminata]
          Length = 847

 Score =  165 bits (417), Expect = 8e-39
 Identities = 93/168 (55%), Positives = 111/168 (66%)
 Frame = -1

Query: 661  EEDDDGKAEMLACAXXXXXXXXXXXIEDDAYNKYMFDDKELPTFFLDYEKRHRQPIKPVT 482
            E DDD KAE+LA A           I DDAYNKYMFDD+ LP +F D EK+H QP KP+T
Sbjct: 631  EMDDDSKAEILAYAKKMLRKKQREQILDDAYNKYMFDDEGLPKWFADEEKQHCQPTKPIT 690

Query: 481  KEEIAAVKAQFKEIDACPXXXXXXXXXXXXXXAMRKLDKVRKKANTISDQTDINERSKMK 302
            +EE+AA+KAQF+EIDA P              AMRKL+KVR+KANTI+DQTDI+ERSK K
Sbjct: 691  REEVAAMKAQFREIDARPAKKVAEAKARKKRAAMRKLEKVRQKANTIADQTDISERSKGK 750

Query: 301  LINQLYKKAMPKKPRKEYXXXXXXXXXXXXXXXXXXVDRRLKKDMRCR 158
            +I++LYKKAMPKKP+KEY                  VDRR+KKD R R
Sbjct: 751  MIDRLYKKAMPKKPKKEY-VVAKKGVRMKVGKGKVLVDRRMKKDARSR 797


>ref|XP_004163010.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like,
           partial [Cucumis sativus]
          Length = 615

 Score =  164 bits (416), Expect = 1e-38
 Identities = 90/166 (54%), Positives = 110/166 (66%)
 Frame = -1

Query: 661 EEDDDGKAEMLACAXXXXXXXXXXXIEDDAYNKYMFDDKELPTFFLDYEKRHRQPIKPVT 482
           +ED D +AE+LACA           I DD+YNKYMFDD  LP +FLD E+RHRQPIKP+T
Sbjct: 393 DEDPDTRAEILACAKKMLRKKQREQILDDSYNKYMFDDSGLPKWFLDEEQRHRQPIKPIT 452

Query: 481 KEEIAAVKAQFKEIDACPXXXXXXXXXXXXXXAMRKLDKVRKKANTISDQTDINERSKMK 302
           KEE+AA++AQFKEIDA P              AM+KL+KVRKKAN ISDQ DI++RSK K
Sbjct: 453 KEEVAAIRAQFKEIDARPAKKVAEAKARKKRIAMKKLEKVRKKANVISDQADISDRSKRK 512

Query: 301 LINQLYKKAMPKKPRKEYXXXXXXXXXXXXXXXXXXVDRRLKKDMR 164
           +I+QLYKKA+P+KP+KE                   VDRR+KKD R
Sbjct: 513 MIDQLYKKAVPQKPKKE-LVVAKKGVQVRVGKGKVLVDRRMKKDAR 557


>ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Cucumis
            sativus]
          Length = 854

 Score =  164 bits (416), Expect = 1e-38
 Identities = 90/166 (54%), Positives = 110/166 (66%)
 Frame = -1

Query: 661  EEDDDGKAEMLACAXXXXXXXXXXXIEDDAYNKYMFDDKELPTFFLDYEKRHRQPIKPVT 482
            +ED D +AE+LACA           I DD+YNKYMFDD  LP +FLD E+RHRQPIKP+T
Sbjct: 632  DEDPDTRAEILACAKKMLRKKQREQILDDSYNKYMFDDSGLPKWFLDEEQRHRQPIKPIT 691

Query: 481  KEEIAAVKAQFKEIDACPXXXXXXXXXXXXXXAMRKLDKVRKKANTISDQTDINERSKMK 302
            KEE+AA++AQFKEIDA P              AM+KL+KVRKKAN ISDQ DI++RSK K
Sbjct: 692  KEEVAAIRAQFKEIDARPAKKVAEAKARKKRIAMKKLEKVRKKANVISDQADISDRSKRK 751

Query: 301  LINQLYKKAMPKKPRKEYXXXXXXXXXXXXXXXXXXVDRRLKKDMR 164
            +I+QLYKKA+P+KP+KE                   VDRR+KKD R
Sbjct: 752  MIDQLYKKAVPQKPKKE-LVVAKKGVQVRVGKGKVLVDRRMKKDAR 796


>ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 829

 Score =  164 bits (415), Expect = 1e-38
 Identities = 92/166 (55%), Positives = 109/166 (65%)
 Frame = -1

Query: 661  EEDDDGKAEMLACAXXXXXXXXXXXIEDDAYNKYMFDDKELPTFFLDYEKRHRQPIKPVT 482
            EED + KAE+LA A           + DDAYNKYMFDD+ LP +FLD E+RHRQPIKP+T
Sbjct: 628  EEDTEAKAEILAYAKKMMRKKQREQMLDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPIT 687

Query: 481  KEEIAAVKAQFKEIDACPXXXXXXXXXXXXXXAMRKLDKVRKKANTISDQTDINERSKMK 302
            KEEIAA+KAQFKEIDA P              AMRKL+KVRKKAN ISDQT+I++ SK K
Sbjct: 688  KEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQTEISDSSKRK 747

Query: 301  LINQLYKKAMPKKPRKEYXXXXXXXXXXXXXXXXXXVDRRLKKDMR 164
             I QLYK+A+PK+P+KEY                  VDRR+KKD R
Sbjct: 748  QIEQLYKRAVPKRPKKEY-VVAKKGVQVRAGKGKVLVDRRMKKDAR 792


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