BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036041
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]             327   4e-87
ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|2...   323   5e-86
ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|1...   318   1e-84
ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloropl...   316   6e-84
ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1,...   312   1e-82

>gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]
          Length = 257

 Score =  327 bits (837), Expect = 4e-87
 Identities = 166/230 (72%), Positives = 191/230 (83%), Gaps = 2/230 (0%)
 Frame = -3

Query: 919 PGSRVLCTCRVQHHTASKVPRRNVLALMLSSVIFQD-GSCDN-ALAQPSVAFREYIDSFD 746
           P +  LCT R Q   AS +PRRN +AL+LS+ IF + G  DN A A+PSV FREYID+FD
Sbjct: 26  PSASCLCTRRNQSFQASSIPRRNAMALILSTYIFSEVGLHDNIAFAEPSVGFREYIDTFD 85

Query: 745 GYSFKYPQNWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQVAGEKV 566
           GYS KYPQNWI VRGAGADIFFRDP++LDENL             +VEDLGPP+ AG+KV
Sbjct: 86  GYSLKYPQNWIQVRGAGADIFFRDPYVLDENLSVELSSPSSSRYKTVEDLGPPEEAGKKV 145

Query: 565 LKQYLTEFMSTRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIP 386
           LKQYLTEFMSTRLGVRRE++I STSSRVADDGKLYYQ+EVNIKSYAN NELAVMP++R+P
Sbjct: 146 LKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANTNELAVMPQDRVP 205

Query: 385 RLEWDRRYLSVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKV 236
           RLEW+RRYLSVLGVEN +LYELRLQTPE+VF+EEE DLR+VM+SFRV KV
Sbjct: 206 RLEWNRRYLSVLGVENNRLYELRLQTPESVFVEEENDLRQVMDSFRVNKV 255


>ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|222871497|gb|EEF08628.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  323 bits (828), Expect = 5e-86
 Identities = 165/211 (78%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
 Frame = -3

Query: 865 VPRRNVLALMLSSVIFQDGSCDN-ALAQPSVAFREYIDSFDGYSFKYPQNWIPVRGAGAD 689
           VPRRN +AL+LSS +F +   DN A AQ SV FREYID FDGYSFKYPQNWI VRGAGAD
Sbjct: 2   VPRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGAD 61

Query: 688 IFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQVAGEKVLKQYLTEFMSTRLGVRREA 509
           IFFRDPF+LDENL             SVEDLGPPQ AG+KVLKQYLTEFMSTRLGVRRE+
Sbjct: 62  IFFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRES 121

Query: 508 SIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYLSVLGVENKQL 329
           +I STSSRVADDGKLYYQ+EVNIKSYANNNELAVMP  R+ RLEWDRRYLSVLGVEN QL
Sbjct: 122 NILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPRERVVRLEWDRRYLSVLGVENNQL 181

Query: 328 YELRLQTPENVFLEEEGDLRKVMESFRVFKV 236
           YELRLQTPENVF+EEE DLRKVM+SFRV K+
Sbjct: 182 YELRLQTPENVFVEEENDLRKVMDSFRVNKI 212


>ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|118485159|gb|ABK94442.1|
            unknown [Populus trichocarpa] gi|222857851|gb|EEE95398.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  318 bits (816), Expect = 1e-84
 Identities = 171/262 (65%), Positives = 195/262 (74%), Gaps = 5/262 (1%)
 Frame = -3

Query: 1003 IPSHSPTSCLNRKATSLLPWLKFAPSAFPGSRVLCTCRVQHHT----ASKVPRRNVLALM 836
            + S  P + L     S   WL  +    P S   C   + H+     A  VPRRN +AL+
Sbjct: 5    LDSFPPPTQLTHPTRSRPTWLSCSMPISPNST--CFSSIPHNKQLTKAFAVPRRNAMALI 62

Query: 835  LSSVIFQDGSCDN-ALAQPSVAFREYIDSFDGYSFKYPQNWIPVRGAGADIFFRDPFILD 659
            LSS IF +   +N A AQ SV FREYID FDGYS K+PQNWI VRGAGADIFFRDPF+LD
Sbjct: 63   LSSYIFSEVGFNNIAFAQRSVGFREYIDQFDGYSLKHPQNWIQVRGAGADIFFRDPFVLD 122

Query: 658  ENLXXXXXXXXXXXXXSVEDLGPPQVAGEKVLKQYLTEFMSTRLGVRREASIRSTSSRVA 479
            ENL             SVEDLGPP+ AG+KVLKQYLTEFMSTRLGVRRE++I STSSRVA
Sbjct: 123  ENLSVELSSPSSSNYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNIISTSSRVA 182

Query: 478  DDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYLSVLGVENKQLYELRLQTPEN 299
            DDGKLYYQ+EVNIKSYANNNELAVMP+ R+ RLEW+RRY+SVLGVEN +LYELRLQTPEN
Sbjct: 183  DDGKLYYQVEVNIKSYANNNELAVMPQERVVRLEWNRRYMSVLGVENNRLYELRLQTPEN 242

Query: 298  VFLEEEGDLRKVMESFRVFKVT 233
            VF+EEE DLR+VM+SFRV KVT
Sbjct: 243  VFVEEENDLRQVMDSFRVNKVT 264


>ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223548498|gb|EEF49989.1| Thylakoid
           lumenal 21.5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 265

 Score =  316 bits (810), Expect = 6e-84
 Identities = 162/222 (72%), Positives = 184/222 (82%), Gaps = 1/222 (0%)
 Frame = -3

Query: 898 TCRVQHHTASKVPRRNVLALMLSSVIFQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQ 722
           +C+ Q   A  VPRR+ +AL+ SS I  + G   +ALAQ SV FREYID+FDGYSFKYP+
Sbjct: 44  SCKNQPTKAFAVPRRSTMALIFSSCILSEVGFHSSALAQSSVGFREYIDTFDGYSFKYPK 103

Query: 721 NWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQVAGEKVLKQYLTEF 542
           NWI VRGAGADIFFRDP++LDENL             SVEDLGPPQ AG+KVLKQYLTEF
Sbjct: 104 NWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSKYTSVEDLGPPQEAGKKVLKQYLTEF 163

Query: 541 MSTRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRY 362
           MSTRLGVRRE+ I STSSRVADDGKLYYQ+EVNIKSYANNNE+AVMP++R+ RLEW+RRY
Sbjct: 164 MSTRLGVRRESDILSTSSRVADDGKLYYQVEVNIKSYANNNEMAVMPQDRVVRLEWNRRY 223

Query: 361 LSVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKV 236
           LSVLGVEN +LYELRLQTPENVF+EEE DLR+VMESFRV KV
Sbjct: 224 LSVLGVENNRLYELRLQTPENVFVEEENDLRQVMESFRVNKV 265


>ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1, chloroplastic [Vitis
            vinifera]
          Length = 282

 Score =  312 bits (799), Expect = 1e-82
 Identities = 175/282 (62%), Positives = 203/282 (71%), Gaps = 15/282 (5%)
 Frame = -3

Query: 1033 MATTLLQTISIP----SHSPTSCLNRKATSLLPWLKFAPSAFPG----------SRVLCT 896
            MAT L   +  P    S S +S   + A S  P + F    FP           SR + +
Sbjct: 1    MATVLNSLLPPPTRRSSSSSSSSSTQPAGSTRPTMSFHYPDFPAPFATTNYSASSRAI-S 59

Query: 895  CRVQHHTASKVPRRNVLALMLSSVIFQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQN 719
            C++Q      V RR+ +AL+ SS IF   G  D ALAQPSV FREYID+FDGYSFKYPQN
Sbjct: 60   CQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDVALAQPSVGFREYIDTFDGYSFKYPQN 119

Query: 718  WIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQVAGEKVLKQYLTEFM 539
            WI VRG+GADIFFRDPF+LDENL             SVEDLG PQ AG+KVL+QYLTEFM
Sbjct: 120  WIQVRGSGADIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGQPQEAGKKVLQQYLTEFM 179

Query: 538  STRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYL 359
            STRLGVRRE++I STSSRVADDG+ YYQ+EVNIKSYANNNELAVMP +R+ RLEWDRRYL
Sbjct: 180  STRLGVRRESNIVSTSSRVADDGRTYYQVEVNIKSYANNNELAVMPTDRVTRLEWDRRYL 239

Query: 358  SVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKVT 233
            SVLGVEN +LYELRLQTPE+VFLEEE +LR+VM+SFRV K +
Sbjct: 240  SVLGVENNRLYELRLQTPESVFLEEENELRQVMDSFRVNKAS 281