BLASTX nr result

ID: Coptis25_contig00036040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036040
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]    56   8e-06

>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
 Frame = -2

Query: 786 VPEFRYWRCEKCLKSADTDAKENGEISNHDKCVSCSHKN----VSMPSHGGASMSLFGPQ 619
           VP+FR+W C+ CL+   T A E  EI+    C +  +K+    + M S G  ++ L    
Sbjct: 242 VPKFRWWHCQNCLQEIGTKASEK-EIATVPSCNNTVYKSNGTCLHMTSRGAETVLLLDYP 300

Query: 618 KSSGEGYFEG-ETDASATVGVNEVENNITLSVDIQEKEAEVMDIVREDVYLSTDVVVAAE 442
           ++      EG + DAS +  VN+ E++++L  D Q+K+AEV              ++  +
Sbjct: 301 RALNVDISEGRKVDASTSGNVNDNEHHVSLCSDKQDKQAEV-----------ACSIIIGD 349

Query: 441 KNKGCEDGEAGNANKDTFPSDGHDTGTTNKAKEPCLPGVANEAGDKKSLKIS 286
           +N+  ED +      +  P         N    PCL  +  +AGD  +L+++
Sbjct: 350 ENRSEEDAD------ZVIPEPPCGAAKVN----PCLL-MEKQAGDTVALELN 390


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