BLASTX nr result

ID: Coptis25_contig00036037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036037
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]    89   4e-16
gb|ABA94843.1| retrotransposon protein, putative, unclassified [...    87   1e-15
emb|CAI44632.1| B1168G10.16 [Oryza sativa Japonica Group]              86   4e-15
emb|CAE02228.2| OSJNBb0015C06.6 [Oryza sativa Japonica Group]          86   4e-15
emb|CAN61771.1| hypothetical protein VITISV_041899 [Vitis vinifera]    85   5e-15

>emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]
          Length = 622

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/79 (51%), Positives = 60/79 (75%)
 Frame = -2

Query: 349 ASFQKLGNTIFECLIGDTVEIYIDDIVIKSWLTSDHLRDLQKTFDGVIKFNLKLNPAKCS 170
           A++Q+L   IF+ LIGD VE+YIDD+V+KS   S+H + LQK F  + K+ +KLNPAKC+
Sbjct: 32  ATYQRLMTKIFKPLIGDVVEVYIDDVVVKSKTRSEHTQHLQKVFHLLRKYGMKLNPAKCA 91

Query: 169 FGVFL*EYLGYLMTHRGID 113
           FGV   ++LG+++T RGI+
Sbjct: 92  FGVSSGKFLGFMVTQRGIE 110


>gb|ABA94843.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1162

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/79 (53%), Positives = 56/79 (70%)
 Frame = -2

Query: 349 ASFQKLGNTIFECLIGDTVEIYIDDIVIKSWLTSDHLRDLQKTFDGVIKFNLKLNPAKCS 170
           A++QK  N IF  LIG  VEIYIDD+V+KS    DH+ DL+K F+   K+ LK+NP KC+
Sbjct: 742 ATYQKAVNYIFHDLIGLLVEIYIDDVVVKSKEVDDHIADLRKVFERTRKYGLKMNPTKCA 801

Query: 169 FGVFL*EYLGYLMTHRGID 113
           FGV   +YLG+L+  RGI+
Sbjct: 802 FGVSTGQYLGFLVHERGIE 820


>emb|CAI44632.1| B1168G10.16 [Oryza sativa Japonica Group]
          Length = 1193

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/79 (48%), Positives = 57/79 (72%)
 Frame = -2

Query: 349 ASFQKLGNTIFECLIGDTVEIYIDDIVIKSWLTSDHLRDLQKTFDGVIKFNLKLNPAKCS 170
           A++Q+  N I+  LIG  VE+YIDD+V+KS    DH+ DL K F+ + K+ LK+NP KC+
Sbjct: 709 ATYQRAMNYIYHDLIGWLVEVYIDDVVVKSMKIEDHIADLMKVFERIRKYGLKMNPTKCA 768

Query: 169 FGVFL*EYLGYLMTHRGID 113
           FGV + ++LG+L+  RGI+
Sbjct: 769 FGVSVGQFLGFLVHERGIE 787


>emb|CAE02228.2| OSJNBb0015C06.6 [Oryza sativa Japonica Group]
          Length = 1141

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/79 (48%), Positives = 57/79 (72%)
 Frame = -2

Query: 349 ASFQKLGNTIFECLIGDTVEIYIDDIVIKSWLTSDHLRDLQKTFDGVIKFNLKLNPAKCS 170
           A++Q+  N I+  LIG  VE+YIDD+V+KS    DH+ DL K F+ + K+ LK+NP KC+
Sbjct: 709 ATYQRAMNYIYHDLIGWLVEVYIDDVVVKSMKIEDHIADLMKVFERIRKYGLKMNPTKCA 768

Query: 169 FGVFL*EYLGYLMTHRGID 113
           FGV + ++LG+L+  RGI+
Sbjct: 769 FGVSVGQFLGFLVHERGIE 787


>emb|CAN61771.1| hypothetical protein VITISV_041899 [Vitis vinifera]
          Length = 852

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/79 (49%), Positives = 60/79 (75%)
 Frame = -2

Query: 349 ASFQKLGNTIFECLIGDTVEIYIDDIVIKSWLTSDHLRDLQKTFDGVIKFNLKLNPAKCS 170
           A++Q+L   IF+ LIG TVE+YIDDIV+KS    +H+  LQK F  + K+++KLNP+KC+
Sbjct: 109 ATYQRLMTNIFKPLIGHTVEVYIDDIVVKSKTREEHVLHLQKVFHLLRKYDMKLNPSKCA 168

Query: 169 FGVFL*EYLGYLMTHRGID 113
           FGV   ++LG++++ RGI+
Sbjct: 169 FGVSAGKFLGFMVSQRGIE 187


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