BLASTX nr result

ID: Coptis25_contig00036015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036015
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511874.1| Sialin, putative [Ricinus communis] gi|22354...   194   8e-48
ref|XP_003520968.1| PREDICTED: probable anion transporter 2, chl...   191   4e-47
ref|XP_002320139.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_003528848.1| PREDICTED: probable anion transporter 2, chl...   190   9e-47
emb|CBI40390.3| unnamed protein product [Vitis vinifera]              190   9e-47

>ref|XP_002511874.1| Sialin, putative [Ricinus communis] gi|223549054|gb|EEF50543.1|
           Sialin, putative [Ricinus communis]
          Length = 571

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/101 (92%), Positives = 98/101 (97%)
 Frame = -3

Query: 304 LTQLSRVRTPAFAVLCMACSQGLDAFSQSGLYSNHQDIGPRYSGVLLGLSNTAGVLAGVF 125
           LTQLS VRTPA AVLCMACSQG DAFSQSGLYSNHQDIGPRY+GVLLGLSNTAGVLAGVF
Sbjct: 469 LTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF 528

Query: 124 GTAATGYILQRGSWDDVFKVAVILYIVGTLIWNLFATGEKI 2
           GTAATGYILQRGSWDDVFKVAV+LYI+GTL+WNLF+TGEKI
Sbjct: 529 GTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFSTGEKI 569


>ref|XP_003520968.1| PREDICTED: probable anion transporter 2, chloroplastic-like
           [Glycine max]
          Length = 593

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/101 (91%), Positives = 97/101 (96%)
 Frame = -3

Query: 304 LTQLSRVRTPAFAVLCMACSQGLDAFSQSGLYSNHQDIGPRYSGVLLGLSNTAGVLAGVF 125
           LTQLS VRTPA AVLCMACSQG DAFSQSGLYSNHQDIGPRY+GVLLGLSNTAGVLAGVF
Sbjct: 491 LTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF 550

Query: 124 GTAATGYILQRGSWDDVFKVAVILYIVGTLIWNLFATGEKI 2
           GTAATGYILQRGSWDDVFKVAV LYI+GTL+WN+F+TGEKI
Sbjct: 551 GTAATGYILQRGSWDDVFKVAVALYIIGTLVWNIFSTGEKI 591


>ref|XP_002320139.1| predicted protein [Populus trichocarpa] gi|222860912|gb|EEE98454.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/101 (91%), Positives = 97/101 (96%)
 Frame = -3

Query: 304 LTQLSRVRTPAFAVLCMACSQGLDAFSQSGLYSNHQDIGPRYSGVLLGLSNTAGVLAGVF 125
           LTQLS VRTPA AVLCMACSQG DAFSQSGLYSNHQDIGPRY+GVLLGLSNTAGVLAGVF
Sbjct: 439 LTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF 498

Query: 124 GTAATGYILQRGSWDDVFKVAVILYIVGTLIWNLFATGEKI 2
           GTAATGYILQRGSWDDVFKVAV LYI+GT++WNLF+TGEKI
Sbjct: 499 GTAATGYILQRGSWDDVFKVAVALYIIGTVVWNLFSTGEKI 539


>ref|XP_003528848.1| PREDICTED: probable anion transporter 2, chloroplastic-like
           [Glycine max]
          Length = 592

 Score =  190 bits (483), Expect = 9e-47
 Identities = 91/101 (90%), Positives = 97/101 (96%)
 Frame = -3

Query: 304 LTQLSRVRTPAFAVLCMACSQGLDAFSQSGLYSNHQDIGPRYSGVLLGLSNTAGVLAGVF 125
           LTQLS V+TPA AVLCMACSQG DAFSQSGLYSNHQDIGPRY+GVLLGLSNTAGVLAGVF
Sbjct: 490 LTQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF 549

Query: 124 GTAATGYILQRGSWDDVFKVAVILYIVGTLIWNLFATGEKI 2
           GTAATGYILQRGSWDDVFKVAV LYI+GTL+WN+F+TGEKI
Sbjct: 550 GTAATGYILQRGSWDDVFKVAVALYIIGTLVWNIFSTGEKI 590


>emb|CBI40390.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  190 bits (483), Expect = 9e-47
 Identities = 91/101 (90%), Positives = 96/101 (95%)
 Frame = -3

Query: 304 LTQLSRVRTPAFAVLCMACSQGLDAFSQSGLYSNHQDIGPRYSGVLLGLSNTAGVLAGVF 125
           LTQL  +RTPA AVLCMACSQG DAFSQSGLYSNHQDIGPRY+GVLLGLSNTAGVLAGVF
Sbjct: 473 LTQLGNIRTPALAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVF 532

Query: 124 GTAATGYILQRGSWDDVFKVAVILYIVGTLIWNLFATGEKI 2
           GTAATGYILQRGSW DVFKVAV+LYI+GTL+WNLFATGEKI
Sbjct: 533 GTAATGYILQRGSWGDVFKVAVVLYIIGTLVWNLFATGEKI 573


Top