BLASTX nr result

ID: Coptis25_contig00036000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036000
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14898.3| unnamed protein product [Vitis vinifera]              110   2e-22
emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]   107   8e-22
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...    95   5e-18

>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -3

Query: 222 RARELMRSRIDPMQLISQLANLIMDILAGRSQIGISKVKRHFFRANTAELDINKLKHALN 43
           RARELMRSRIDPMQLISQLANLIMDILAG+ Q G S+V+R+FF  +T+E+D+ KL HAL 
Sbjct: 415 RARELMRSRIDPMQLISQLANLIMDILAGKCQEGTSEVRRNFFEGHTSEVDLQKLSHALK 474

Query: 42  LLSEAEKQLRTSKN 1
           +LSE EKQLR SKN
Sbjct: 475 ILSETEKQLRASKN 488


>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/74 (72%), Positives = 63/74 (85%)
 Frame = -3

Query: 222 RARELMRSRIDPMQLISQLANLIMDILAGRSQIGISKVKRHFFRANTAELDINKLKHALN 43
           RARELMRSRIDPMQLISQLANLIMDILAG+ Q G S+V+ +FF  +T+E+D+ KL HAL 
Sbjct: 597 RARELMRSRIDPMQLISQLANLIMDILAGKCQEGTSEVRXNFFEGHTSEVDLQKLSHALK 656

Query: 42  LLSEAEKQLRTSKN 1
           +LSE EKQLR SKN
Sbjct: 657 ILSETEKQLRASKN 670


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 61/74 (82%)
 Frame = -3

Query: 222 RARELMRSRIDPMQLISQLANLIMDILAGRSQIGISKVKRHFFRANTAELDINKLKHALN 43
           RARELMRSRIDPM+L+SQLANLIMD+LAG+ Q   S+V+R F R + +E D+ +L HAL 
Sbjct: 553 RARELMRSRIDPMRLVSQLANLIMDVLAGKCQDNSSEVRRKFSRKHASEGDMQRLSHALK 612

Query: 42  LLSEAEKQLRTSKN 1
           +LSE+EKQLR SKN
Sbjct: 613 ILSESEKQLRMSKN 626


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
           predicted protein [Populus trichocarpa]
          Length = 907

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/74 (64%), Positives = 62/74 (83%)
 Frame = -3

Query: 222 RARELMRSRIDPMQLISQLANLIMDILAGRSQIGISKVKRHFFRANTAELDINKLKHALN 43
           RARELMRSRIDPMQL+SQLANLIMD+LAG+ +   S+V+R F R +++E D+ +L HAL 
Sbjct: 511 RARELMRSRIDPMQLVSQLANLIMDVLAGKCKDDSSEVRRKFSRKHSSEGDMQRLSHALK 570

Query: 42  LLSEAEKQLRTSKN 1
           +LSE+EKQLR S+N
Sbjct: 571 ILSESEKQLRMSRN 584


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/74 (63%), Positives = 59/74 (79%)
 Frame = -3

Query: 222 RARELMRSRIDPMQLISQLANLIMDILAGRSQIGISKVKRHFFRANTAELDINKLKHALN 43
           RAR+L+R+RIDP+QLISQLANLIMDILAG+ ++G S+ +  F    T+E D+ KL HAL 
Sbjct: 553 RARKLVRTRIDPLQLISQLANLIMDILAGKCELGASETRTRFCNRYTSEADMQKLSHALR 612

Query: 42  LLSEAEKQLRTSKN 1
           +LSE EKQLR SKN
Sbjct: 613 ILSETEKQLRISKN 626


Top