BLASTX nr result
ID: Coptis25_contig00035995
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035995 (246 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK24758.1| unknown [Picea sitchensis] 115 3e-24 ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|2... 111 5e-23 ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|2... 111 5e-23 ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit ... 110 2e-22 emb|CBI37693.3| unnamed protein product [Vitis vinifera] 110 2e-22 >gb|ABK24758.1| unknown [Picea sitchensis] Length = 363 Score = 115 bits (289), Expect = 3e-24 Identities = 60/81 (74%), Positives = 70/81 (86%), Gaps = 2/81 (2%) Frame = +3 Query: 9 ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFL-QPNTKKEED 182 + + YW NTLSSSPLLG+RDYVAGQISDLAEKLEQAE+ + H++ GSFL P KKEE+ Sbjct: 248 LLWNKYWVNTLSSSPLLGNRDYVAGQISDLAEKLEQAESQLAHSRVGSFLVPPQRKKEEE 307 Query: 183 NQLAKITRDSSKITVEQVHGL 245 +QLAKIT+DSSKITVEQVHGL Sbjct: 308 SQLAKITKDSSKITVEQVHGL 328 >ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|222872607|gb|EEF09738.1| predicted protein [Populus trichocarpa] Length = 366 Score = 111 bits (278), Expect = 5e-23 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 1/80 (1%) Frame = +3 Query: 9 ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKEEDN 185 + + YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G + P KK+E++ Sbjct: 255 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMTPQRKKDEES 314 Query: 186 QLAKITRDSSKITVEQVHGL 245 QLAKITRDS+KITVEQVHGL Sbjct: 315 QLAKITRDSAKITVEQVHGL 334 >ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|222865830|gb|EEF02961.1| predicted protein [Populus trichocarpa] Length = 366 Score = 111 bits (278), Expect = 5e-23 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 1/80 (1%) Frame = +3 Query: 9 ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKEEDN 185 + + YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G + P KK+E++ Sbjct: 255 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMAPQRKKDEES 314 Query: 186 QLAKITRDSSKITVEQVHGL 245 QLAKITRDS+KITVEQVHGL Sbjct: 315 QLAKITRDSAKITVEQVHGL 334 >ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis sativus] gi|449499546|ref|XP_004160845.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis sativus] Length = 365 Score = 110 bits (274), Expect = 2e-22 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = +3 Query: 9 ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKKEED 182 + + YW NTLSSSPLLG+ DYVAGQISDLAEKLEQ EN + H++ G + P+ KKEED Sbjct: 253 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQVENQLAHSRFGPLIAPSQRKKEED 312 Query: 183 NQLAKITRDSSKITVEQVHGL 245 +QLAKITRDS+KITVEQVHGL Sbjct: 313 SQLAKITRDSAKITVEQVHGL 333 >emb|CBI37693.3| unnamed protein product [Vitis vinifera] Length = 260 Score = 110 bits (274), Expect = 2e-22 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = +3 Query: 9 ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKKEED 182 + + YW NTLSSSPLLG+ DYVAGQISDLAEKLEQAEN + H++ G + P+ KKEE+ Sbjct: 148 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKKEEE 207 Query: 183 NQLAKITRDSSKITVEQVHGL 245 +QLAKITRDS+KITVEQVHGL Sbjct: 208 SQLAKITRDSAKITVEQVHGL 228