BLASTX nr result

ID: Coptis25_contig00035995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035995
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24758.1| unknown [Picea sitchensis]                             115   3e-24
ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit ...   110   2e-22
emb|CBI37693.3| unnamed protein product [Vitis vinifera]              110   2e-22

>gb|ABK24758.1| unknown [Picea sitchensis]
          Length = 363

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/81 (74%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
 Frame = +3

Query: 9   ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFL-QPNTKKEED 182
           + +  YW NTLSSSPLLG+RDYVAGQISDLAEKLEQAE+ + H++ GSFL  P  KKEE+
Sbjct: 248 LLWNKYWVNTLSSSPLLGNRDYVAGQISDLAEKLEQAESQLAHSRVGSFLVPPQRKKEEE 307

Query: 183 NQLAKITRDSSKITVEQVHGL 245
           +QLAKIT+DSSKITVEQVHGL
Sbjct: 308 SQLAKITKDSSKITVEQVHGL 328


>ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|222872607|gb|EEF09738.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = +3

Query: 9   ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKEEDN 185
           + +  YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G  + P  KK+E++
Sbjct: 255 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMTPQRKKDEES 314

Query: 186 QLAKITRDSSKITVEQVHGL 245
           QLAKITRDS+KITVEQVHGL
Sbjct: 315 QLAKITRDSAKITVEQVHGL 334


>ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|222865830|gb|EEF02961.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = +3

Query: 9   ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKEEDN 185
           + +  YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G  + P  KK+E++
Sbjct: 255 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMAPQRKKDEES 314

Query: 186 QLAKITRDSSKITVEQVHGL 245
           QLAKITRDS+KITVEQVHGL
Sbjct: 315 QLAKITRDSAKITVEQVHGL 334


>ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis
           sativus] gi|449499546|ref|XP_004160845.1| PREDICTED:
           COP9 signalosome complex subunit 5a-like [Cucumis
           sativus]
          Length = 365

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = +3

Query: 9   ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKKEED 182
           + +  YW NTLSSSPLLG+ DYVAGQISDLAEKLEQ EN + H++ G  + P+  KKEED
Sbjct: 253 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQVENQLAHSRFGPLIAPSQRKKEED 312

Query: 183 NQLAKITRDSSKITVEQVHGL 245
           +QLAKITRDS+KITVEQVHGL
Sbjct: 313 SQLAKITRDSAKITVEQVHGL 333


>emb|CBI37693.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = +3

Query: 9   ICYGTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKKEED 182
           + +  YW NTLSSSPLLG+ DYVAGQISDLAEKLEQAEN + H++ G  + P+  KKEE+
Sbjct: 148 LLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKKEEE 207

Query: 183 NQLAKITRDSSKITVEQVHGL 245
           +QLAKITRDS+KITVEQVHGL
Sbjct: 208 SQLAKITRDSAKITVEQVHGL 228


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