BLASTX nr result

ID: Coptis25_contig00035976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035976
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298074.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
gb|AFK39106.1| unknown [Medicago truncatula]                          135   5e-30
ref|XP_003631426.1| PREDICTED: protein HOTHEAD isoform 2 [Vitis ...   135   5e-30
ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula] ...   135   5e-30
ref|XP_002282510.2| PREDICTED: protein HOTHEAD isoform 1 [Vitis ...   135   5e-30

>ref|XP_002298074.1| predicted protein [Populus trichocarpa] gi|222845332|gb|EEE82879.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/89 (75%), Positives = 74/89 (83%)
 Frame = +1

Query: 1   LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180
           LE GV P NGFTYD I GTKVGGTIFDR G+RHTAADLLEYANP GLTVLL+ATV++ILF
Sbjct: 179 LEAGVLPNNGFTYDHIKGTKVGGTIFDRAGNRHTAADLLEYANPGGLTVLLHATVYKILF 238

Query: 181 STKRNPKPAAHGVVFTDALGIMHRAYLNK 267
           +TK  PKP AHGVV+ DA G  HRAYL +
Sbjct: 239 ATKARPKPVAHGVVYRDASGAKHRAYLKR 267


>gb|AFK39106.1| unknown [Medicago truncatula]
          Length = 412

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/91 (72%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180
           LEVGV PYNGFTYD I GTKVGGTIFD NGHRHTAADLLEYAN   +T+LL+ATVHRILF
Sbjct: 13  LEVGVLPYNGFTYDHIHGTKVGGTIFDHNGHRHTAADLLEYANTNTITLLLHATVHRILF 72

Query: 181 ST---KRNPKPAAHGVVFTDALGIMHRAYLN 264
           +T   + N +P AHGV++ DA G  HRAYLN
Sbjct: 73  TTHKERSNSRPVAHGVLYKDARGTEHRAYLN 103


>ref|XP_003631426.1| PREDICTED: protein HOTHEAD isoform 2 [Vitis vinifera]
          Length = 568

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/89 (69%), Positives = 72/89 (80%)
 Frame = +1

Query: 1   LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180
           LEVGV PYNGFTYD I GTK+GGTIFD +GHRHTAADLL+YANP GLTVLL+ATVH+I F
Sbjct: 180 LEVGVLPYNGFTYDHIYGTKIGGTIFDPDGHRHTAADLLQYANPTGLTVLLHATVHKITF 239

Query: 181 STKRNPKPAAHGVVFTDALGIMHRAYLNK 267
             +   +P AHGV+F D LG  H+AYL +
Sbjct: 240 RRRGKVRPVAHGVIFRDVLGKKHKAYLKR 268


>ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula]
           gi|355512500|gb|AES94123.1| Choline dehydrogenase
           [Medicago truncatula]
          Length = 580

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/91 (72%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180
           LEVGV PYNGFTYD I GTKVGGTIFD NGHRHTAADLLEYAN   +T+LL+ATVHRILF
Sbjct: 181 LEVGVLPYNGFTYDHIHGTKVGGTIFDHNGHRHTAADLLEYANTNTITLLLHATVHRILF 240

Query: 181 ST---KRNPKPAAHGVVFTDALGIMHRAYLN 264
           +T   + N +P AHGV++ DA G  HRAYLN
Sbjct: 241 TTHKERSNSRPVAHGVLYKDARGTEHRAYLN 271


>ref|XP_002282510.2| PREDICTED: protein HOTHEAD isoform 1 [Vitis vinifera]
           gi|297742610|emb|CBI34759.3| unnamed protein product
           [Vitis vinifera]
          Length = 578

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/89 (69%), Positives = 72/89 (80%)
 Frame = +1

Query: 1   LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180
           LEVGV PYNGFTYD I GTK+GGTIFD +GHRHTAADLL+YANP GLTVLL+ATVH+I F
Sbjct: 180 LEVGVLPYNGFTYDHIYGTKIGGTIFDPDGHRHTAADLLQYANPTGLTVLLHATVHKITF 239

Query: 181 STKRNPKPAAHGVVFTDALGIMHRAYLNK 267
             +   +P AHGV+F D LG  H+AYL +
Sbjct: 240 RRRGKVRPVAHGVIFRDVLGKKHKAYLKR 268


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