BLASTX nr result
ID: Coptis25_contig00035976
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035976 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298074.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-31 gb|AFK39106.1| unknown [Medicago truncatula] 135 5e-30 ref|XP_003631426.1| PREDICTED: protein HOTHEAD isoform 2 [Vitis ... 135 5e-30 ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula] ... 135 5e-30 ref|XP_002282510.2| PREDICTED: protein HOTHEAD isoform 1 [Vitis ... 135 5e-30 >ref|XP_002298074.1| predicted protein [Populus trichocarpa] gi|222845332|gb|EEE82879.1| predicted protein [Populus trichocarpa] Length = 577 Score = 139 bits (349), Expect = 3e-31 Identities = 67/89 (75%), Positives = 74/89 (83%) Frame = +1 Query: 1 LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180 LE GV P NGFTYD I GTKVGGTIFDR G+RHTAADLLEYANP GLTVLL+ATV++ILF Sbjct: 179 LEAGVLPNNGFTYDHIKGTKVGGTIFDRAGNRHTAADLLEYANPGGLTVLLHATVYKILF 238 Query: 181 STKRNPKPAAHGVVFTDALGIMHRAYLNK 267 +TK PKP AHGVV+ DA G HRAYL + Sbjct: 239 ATKARPKPVAHGVVYRDASGAKHRAYLKR 267 >gb|AFK39106.1| unknown [Medicago truncatula] Length = 412 Score = 135 bits (339), Expect = 5e-30 Identities = 66/91 (72%), Positives = 74/91 (81%), Gaps = 3/91 (3%) Frame = +1 Query: 1 LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180 LEVGV PYNGFTYD I GTKVGGTIFD NGHRHTAADLLEYAN +T+LL+ATVHRILF Sbjct: 13 LEVGVLPYNGFTYDHIHGTKVGGTIFDHNGHRHTAADLLEYANTNTITLLLHATVHRILF 72 Query: 181 ST---KRNPKPAAHGVVFTDALGIMHRAYLN 264 +T + N +P AHGV++ DA G HRAYLN Sbjct: 73 TTHKERSNSRPVAHGVLYKDARGTEHRAYLN 103 >ref|XP_003631426.1| PREDICTED: protein HOTHEAD isoform 2 [Vitis vinifera] Length = 568 Score = 135 bits (339), Expect = 5e-30 Identities = 62/89 (69%), Positives = 72/89 (80%) Frame = +1 Query: 1 LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180 LEVGV PYNGFTYD I GTK+GGTIFD +GHRHTAADLL+YANP GLTVLL+ATVH+I F Sbjct: 180 LEVGVLPYNGFTYDHIYGTKIGGTIFDPDGHRHTAADLLQYANPTGLTVLLHATVHKITF 239 Query: 181 STKRNPKPAAHGVVFTDALGIMHRAYLNK 267 + +P AHGV+F D LG H+AYL + Sbjct: 240 RRRGKVRPVAHGVIFRDVLGKKHKAYLKR 268 >ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula] gi|355512500|gb|AES94123.1| Choline dehydrogenase [Medicago truncatula] Length = 580 Score = 135 bits (339), Expect = 5e-30 Identities = 66/91 (72%), Positives = 74/91 (81%), Gaps = 3/91 (3%) Frame = +1 Query: 1 LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180 LEVGV PYNGFTYD I GTKVGGTIFD NGHRHTAADLLEYAN +T+LL+ATVHRILF Sbjct: 181 LEVGVLPYNGFTYDHIHGTKVGGTIFDHNGHRHTAADLLEYANTNTITLLLHATVHRILF 240 Query: 181 ST---KRNPKPAAHGVVFTDALGIMHRAYLN 264 +T + N +P AHGV++ DA G HRAYLN Sbjct: 241 TTHKERSNSRPVAHGVLYKDARGTEHRAYLN 271 >ref|XP_002282510.2| PREDICTED: protein HOTHEAD isoform 1 [Vitis vinifera] gi|297742610|emb|CBI34759.3| unnamed protein product [Vitis vinifera] Length = 578 Score = 135 bits (339), Expect = 5e-30 Identities = 62/89 (69%), Positives = 72/89 (80%) Frame = +1 Query: 1 LEVGVTPYNGFTYDQILGTKVGGTIFDRNGHRHTAADLLEYANPKGLTVLLNATVHRILF 180 LEVGV PYNGFTYD I GTK+GGTIFD +GHRHTAADLL+YANP GLTVLL+ATVH+I F Sbjct: 180 LEVGVLPYNGFTYDHIYGTKIGGTIFDPDGHRHTAADLLQYANPTGLTVLLHATVHKITF 239 Query: 181 STKRNPKPAAHGVVFTDALGIMHRAYLNK 267 + +P AHGV+F D LG H+AYL + Sbjct: 240 RRRGKVRPVAHGVIFRDVLGKKHKAYLKR 268