BLASTX nr result

ID: Coptis25_contig00035975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035975
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278877.1| PREDICTED: uncharacterized protein LOC100260...    80   2e-13
emb|CAN63850.1| hypothetical protein VITISV_016795 [Vitis vinifera]    80   2e-13
ref|XP_002879537.1| hypothetical protein ARALYDRAFT_482485 [Arab...    75   7e-12
ref|NP_181064.1| uncharacterized protein [Arabidopsis thaliana] ...    71   1e-10
gb|AAO37209.1| hypothetical protein [Arabidopsis thaliana]             70   1e-10

>ref|XP_002278877.1| PREDICTED: uncharacterized protein LOC100260856 [Vitis vinifera]
          Length = 222

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 64/148 (43%), Positives = 81/148 (54%), Gaps = 40/148 (27%)
 Frame = -3

Query: 375 RMSTLIDTEPAFQRSRSAAFPFL-YRSKI-------------SNSSPRKWFWN------- 259
           R+S LID+EPAF+RSRS A PFL  RS+              SN S +  FW+       
Sbjct: 81  RVSNLIDSEPAFRRSRSVAIPFLRSRSRFVGNDLEDGRPPNPSNRS-KSSFWSVFKSSKI 139

Query: 258 -----------KVFKKQKDEEVDVK-MVRSKSVGV-IDKDNNG------KVKGRGGSWYF 136
                      +  KK+  E  D+K M+RS+SVG+ +  D+ G      + KGRG  WYF
Sbjct: 140 KKPEETVAEVEETKKKEVGENEDLKRMMRSRSVGISLFSDSGGGGGGDSRSKGRG--WYF 197

Query: 135 PSPIKAFRRSKNSLSSKFYQERSPLCRG 52
           PSPIKAFR+SK   +SK  QERSPL RG
Sbjct: 198 PSPIKAFRQSK---ASKIVQERSPLYRG 222


>emb|CAN63850.1| hypothetical protein VITISV_016795 [Vitis vinifera]
          Length = 222

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 64/148 (43%), Positives = 81/148 (54%), Gaps = 40/148 (27%)
 Frame = -3

Query: 375 RMSTLIDTEPAFQRSRSAAFPFL-YRSKI-------------SNSSPRKWFWN------- 259
           R+S LID+EPAF+RSRS A PFL  RS+              SN S +  FW+       
Sbjct: 81  RVSNLIDSEPAFRRSRSVAIPFLRSRSRFVGNDLEDGRPPNPSNRS-KSSFWSVFKSSKI 139

Query: 258 -----------KVFKKQKDEEVDVK-MVRSKSVGV-IDKDNNG------KVKGRGGSWYF 136
                      +  KK+  E  D+K M+RS+SVG+ +  D+ G      + KGRG  WYF
Sbjct: 140 KKPEETVAEVEETKKKEVGENEDLKRMMRSRSVGISLFSDSGGGGGGDSRSKGRG--WYF 197

Query: 135 PSPIKAFRRSKNSLSSKFYQERSPLCRG 52
           PSPIKAFR+SK   +SK  QERSPL RG
Sbjct: 198 PSPIKAFRQSK---ASKIVQERSPLYRG 222


>ref|XP_002879537.1| hypothetical protein ARALYDRAFT_482485 [Arabidopsis lyrata subsp.
           lyrata] gi|297325376|gb|EFH55796.1| hypothetical protein
           ARALYDRAFT_482485 [Arabidopsis lyrata subsp. lyrata]
          Length = 200

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
 Frame = -3

Query: 375 RMSTLIDTEPAFQRSRSAAFPFLYRSK----ISNSSPRK-----WFWNKVFKKQKDEEVD 223
           R++ LI++EPAF+RS S A P+ + SK    +   S  K     W W  +   +++ ++ 
Sbjct: 84  RVANLIESEPAFRRSTSLAVPYFWSSKPETILETESDLKPGRGRWLWRLLRGNREETKIK 143

Query: 222 VKMVRSKSVGVIDKD--NNGKVKGRGGSWYFPSPIKAFRRSKNSLSSKFYQERSPLCRG 52
              V  KS  V  ++  +   V  +G  WYFPSPIK FR+S+  +S   +Q+RSPL RG
Sbjct: 144 AATVMKKSKSVAGEELFSPAPVASKGNGWYFPSPIKVFRQSR--VSKMIFQQRSPLYRG 200


>ref|NP_181064.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3668085|gb|AAC61817.1| hypothetical protein
           [Arabidopsis thaliana] gi|61742641|gb|AAX55141.1|
           hypothetical protein At2g35200 [Arabidopsis thaliana]
           gi|330253984|gb|AEC09078.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 201

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
 Frame = -3

Query: 375 RMSTLIDTEPAFQRSRSAAFPFLYRSKIS---------NSSPRKWFWNKVFKKQKDEEVD 223
           R++ LI+ EPAF+RS S   P+ + +K                +W W ++F+  ++EE  
Sbjct: 84  RVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDLKPGRGRWLW-RLFRGNREEETK 142

Query: 222 VK----MVRSKSVGVIDKDNNGKVKGRGGSWYFPSPIKAFRRSKNSLSSKFYQERSPLCR 55
           +K    M +S SV      +   V  +G  WYFPSPIK FR+S+  +S   +Q+RSPL R
Sbjct: 143 IKAAKVMKKSNSVAGEVLFSPTPVTSKGNGWYFPSPIKVFRQSR--VSKMIFQQRSPLYR 200

Query: 54  G 52
           G
Sbjct: 201 G 201


>gb|AAO37209.1| hypothetical protein [Arabidopsis thaliana]
          Length = 201

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
 Frame = -3

Query: 375 RMSTLIDTEPAFQRSRSAAFPFLYRSKIS---------NSSPRKWFWNKVFKKQKDEEVD 223
           R++ LI+ EPAF+RS S   P+ + +K                +W W ++F+  ++EE  
Sbjct: 84  RVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDLKPXRGRWLW-RLFRGNREEETK 142

Query: 222 VK----MVRSKSVGVIDKDNNGKVKGRGGSWYFPSPIKAFRRSKNSLSSKFYQERSPLCR 55
           +K    M +S SV      +   V  +G  WYFPSPIK FR+S+  +S   +Q+RSPL R
Sbjct: 143 IKAAKVMKKSNSVAGEVLFSPTPVTSKGNGWYFPSPIKVFRQSR--VSKMIFQQRSPLYR 200

Query: 54  G 52
           G
Sbjct: 201 G 201


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