BLASTX nr result
ID: Coptis25_contig00035975
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035975 (461 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278877.1| PREDICTED: uncharacterized protein LOC100260... 80 2e-13 emb|CAN63850.1| hypothetical protein VITISV_016795 [Vitis vinifera] 80 2e-13 ref|XP_002879537.1| hypothetical protein ARALYDRAFT_482485 [Arab... 75 7e-12 ref|NP_181064.1| uncharacterized protein [Arabidopsis thaliana] ... 71 1e-10 gb|AAO37209.1| hypothetical protein [Arabidopsis thaliana] 70 1e-10 >ref|XP_002278877.1| PREDICTED: uncharacterized protein LOC100260856 [Vitis vinifera] Length = 222 Score = 79.7 bits (195), Expect = 2e-13 Identities = 64/148 (43%), Positives = 81/148 (54%), Gaps = 40/148 (27%) Frame = -3 Query: 375 RMSTLIDTEPAFQRSRSAAFPFL-YRSKI-------------SNSSPRKWFWN------- 259 R+S LID+EPAF+RSRS A PFL RS+ SN S + FW+ Sbjct: 81 RVSNLIDSEPAFRRSRSVAIPFLRSRSRFVGNDLEDGRPPNPSNRS-KSSFWSVFKSSKI 139 Query: 258 -----------KVFKKQKDEEVDVK-MVRSKSVGV-IDKDNNG------KVKGRGGSWYF 136 + KK+ E D+K M+RS+SVG+ + D+ G + KGRG WYF Sbjct: 140 KKPEETVAEVEETKKKEVGENEDLKRMMRSRSVGISLFSDSGGGGGGDSRSKGRG--WYF 197 Query: 135 PSPIKAFRRSKNSLSSKFYQERSPLCRG 52 PSPIKAFR+SK +SK QERSPL RG Sbjct: 198 PSPIKAFRQSK---ASKIVQERSPLYRG 222 >emb|CAN63850.1| hypothetical protein VITISV_016795 [Vitis vinifera] Length = 222 Score = 79.7 bits (195), Expect = 2e-13 Identities = 64/148 (43%), Positives = 81/148 (54%), Gaps = 40/148 (27%) Frame = -3 Query: 375 RMSTLIDTEPAFQRSRSAAFPFL-YRSKI-------------SNSSPRKWFWN------- 259 R+S LID+EPAF+RSRS A PFL RS+ SN S + FW+ Sbjct: 81 RVSNLIDSEPAFRRSRSVAIPFLRSRSRFVGNDLEDGRPPNPSNRS-KSSFWSVFKSSKI 139 Query: 258 -----------KVFKKQKDEEVDVK-MVRSKSVGV-IDKDNNG------KVKGRGGSWYF 136 + KK+ E D+K M+RS+SVG+ + D+ G + KGRG WYF Sbjct: 140 KKPEETVAEVEETKKKEVGENEDLKRMMRSRSVGISLFSDSGGGGGGDSRSKGRG--WYF 197 Query: 135 PSPIKAFRRSKNSLSSKFYQERSPLCRG 52 PSPIKAFR+SK +SK QERSPL RG Sbjct: 198 PSPIKAFRQSK---ASKIVQERSPLYRG 222 >ref|XP_002879537.1| hypothetical protein ARALYDRAFT_482485 [Arabidopsis lyrata subsp. lyrata] gi|297325376|gb|EFH55796.1| hypothetical protein ARALYDRAFT_482485 [Arabidopsis lyrata subsp. lyrata] Length = 200 Score = 74.7 bits (182), Expect = 7e-12 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 11/119 (9%) Frame = -3 Query: 375 RMSTLIDTEPAFQRSRSAAFPFLYRSK----ISNSSPRK-----WFWNKVFKKQKDEEVD 223 R++ LI++EPAF+RS S A P+ + SK + S K W W + +++ ++ Sbjct: 84 RVANLIESEPAFRRSTSLAVPYFWSSKPETILETESDLKPGRGRWLWRLLRGNREETKIK 143 Query: 222 VKMVRSKSVGVIDKD--NNGKVKGRGGSWYFPSPIKAFRRSKNSLSSKFYQERSPLCRG 52 V KS V ++ + V +G WYFPSPIK FR+S+ +S +Q+RSPL RG Sbjct: 144 AATVMKKSKSVAGEELFSPAPVASKGNGWYFPSPIKVFRQSR--VSKMIFQQRSPLYRG 200 >ref|NP_181064.1| uncharacterized protein [Arabidopsis thaliana] gi|3668085|gb|AAC61817.1| hypothetical protein [Arabidopsis thaliana] gi|61742641|gb|AAX55141.1| hypothetical protein At2g35200 [Arabidopsis thaliana] gi|330253984|gb|AEC09078.1| uncharacterized protein [Arabidopsis thaliana] Length = 201 Score = 70.9 bits (172), Expect = 1e-10 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 13/121 (10%) Frame = -3 Query: 375 RMSTLIDTEPAFQRSRSAAFPFLYRSKIS---------NSSPRKWFWNKVFKKQKDEEVD 223 R++ LI+ EPAF+RS S P+ + +K +W W ++F+ ++EE Sbjct: 84 RVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDLKPGRGRWLW-RLFRGNREEETK 142 Query: 222 VK----MVRSKSVGVIDKDNNGKVKGRGGSWYFPSPIKAFRRSKNSLSSKFYQERSPLCR 55 +K M +S SV + V +G WYFPSPIK FR+S+ +S +Q+RSPL R Sbjct: 143 IKAAKVMKKSNSVAGEVLFSPTPVTSKGNGWYFPSPIKVFRQSR--VSKMIFQQRSPLYR 200 Query: 54 G 52 G Sbjct: 201 G 201 >gb|AAO37209.1| hypothetical protein [Arabidopsis thaliana] Length = 201 Score = 70.5 bits (171), Expect = 1e-10 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 13/121 (10%) Frame = -3 Query: 375 RMSTLIDTEPAFQRSRSAAFPFLYRSKIS---------NSSPRKWFWNKVFKKQKDEEVD 223 R++ LI+ EPAF+RS S P+ + +K +W W ++F+ ++EE Sbjct: 84 RVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDLKPXRGRWLW-RLFRGNREEETK 142 Query: 222 VK----MVRSKSVGVIDKDNNGKVKGRGGSWYFPSPIKAFRRSKNSLSSKFYQERSPLCR 55 +K M +S SV + V +G WYFPSPIK FR+S+ +S +Q+RSPL R Sbjct: 143 IKAAKVMKKSNSVAGEVLFSPTPVTSKGNGWYFPSPIKVFRQSR--VSKMIFQQRSPLYR 200 Query: 54 G 52 G Sbjct: 201 G 201