BLASTX nr result

ID: Coptis25_contig00035963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035963
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150550.1| PREDICTED: uncharacterized protein LOC101214...    90   2e-16
ref|XP_002269914.1| PREDICTED: uncharacterized protein LOC100252...    86   3e-15
emb|CAN78292.1| hypothetical protein VITISV_035515 [Vitis vinifera]    86   3e-15
ref|XP_003533476.1| PREDICTED: uncharacterized protein LOC100787...    81   8e-14
ref|XP_003516504.1| PREDICTED: uncharacterized protein LOC100819...    81   1e-13

>ref|XP_004150550.1| PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus]
           gi|449512899|ref|XP_004164173.1| PREDICTED:
           uncharacterized LOC101214190 [Cucumis sativus]
          Length = 200

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = +2

Query: 62  KINLDPKR-THPLVWXXXXXXXXXXXXXXXXGLVIFIGYMIIRPTVPFISVAYANLDNLQ 238
           K+  D KR THPLVW                G+V+FIGY++I P +P IS+  A+LDN Q
Sbjct: 4   KLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQ 63

Query: 239 YDRAGHMDAQMTLLIKAENDNGKAHATFSDLS 334
            D AG ++ Q+T++I+A+NDN KAHA+FSD S
Sbjct: 64  IDIAGRLEVQLTIIIEAKNDNAKAHASFSDSS 95


>ref|XP_002269914.1| PREDICTED: uncharacterized protein LOC100252848 [Vitis vinifera]
          Length = 201

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/97 (46%), Positives = 57/97 (58%)
 Frame = +2

Query: 44  VVGSMQKINLDPKRTHPLVWXXXXXXXXXXXXXXXXGLVIFIGYMIIRPTVPFISVAYAN 223
           VVGS QK       THPLVW                G+ +F+GY++I P VP ++V  A 
Sbjct: 7   VVGSGQK-------THPLVWCAAVICVFIALAVIVAGVCVFVGYLVIHPRVPALTVTDAR 59

Query: 224 LDNLQYDRAGHMDAQMTLLIKAENDNGKAHATFSDLS 334
           LD L + +AG MD QMT+ I+AEN N KAHA+FSD S
Sbjct: 60  LDRLDFSQAGVMDVQMTVYIRAENHNAKAHASFSDTS 96


>emb|CAN78292.1| hypothetical protein VITISV_035515 [Vitis vinifera]
          Length = 687

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/97 (46%), Positives = 57/97 (58%)
 Frame = +2

Query: 44  VVGSMQKINLDPKRTHPLVWXXXXXXXXXXXXXXXXGLVIFIGYMIIRPTVPFISVAYAN 223
           VVGS QK       THPLVW                G+ +F+GY++I P VP ++V  A 
Sbjct: 493 VVGSGQK-------THPLVWCAAVICVFIALAVIVAGVCVFVGYLVIHPRVPALTVTDAR 545

Query: 224 LDNLQYDRAGHMDAQMTLLIKAENDNGKAHATFSDLS 334
           LD L + +AG MD QMT+ I+AEN N KAHA+FSD S
Sbjct: 546 LDRLDFSQAGVMDVQMTVYIRAENHNAKAHASFSDTS 582


>ref|XP_003533476.1| PREDICTED: uncharacterized protein LOC100787678 [Glycine max]
          Length = 217

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/83 (42%), Positives = 52/83 (62%)
 Frame = +2

Query: 83  RTHPLVWXXXXXXXXXXXXXXXXGLVIFIGYMIIRPTVPFISVAYANLDNLQYDRAGHMD 262
           +THPL+W                G+V+F+GYM+I P +P +S+  A+LD L  D AG + 
Sbjct: 28  KTHPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVMSITNAHLDLLSNDYAGLLQ 87

Query: 263 AQMTLLIKAENDNGKAHATFSDL 331
            Q+T+++ A+N N KAHATFSD+
Sbjct: 88  TQLTIIVVAQNGNAKAHATFSDI 110


>ref|XP_003516504.1| PREDICTED: uncharacterized protein LOC100819030 [Glycine max]
          Length = 229

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = +2

Query: 83  RTHPLVWXXXXXXXXXXXXXXXXGLVIFIGYMIIRPTVPFISVAYANLDNLQYDRAGHMD 262
           +THPL+W                G+V+F+GYM+I P +P IS+  A+LD L  D  G + 
Sbjct: 40  KTHPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVISITNAHLDLLSNDYTGLLQ 99

Query: 263 AQMTLLIKAENDNGKAHATFSDL 331
            Q+T+++ A+N N KAHATFSD+
Sbjct: 100 TQLTIIVVAQNGNAKAHATFSDI 122


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