BLASTX nr result

ID: Coptis25_contig00035929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035929
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73536.1| hypothetical protein VITISV_042993 [Vitis vinifera]   139   2e-31
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...   132   3e-29
emb|CBI40600.3| unnamed protein product [Vitis vinifera]              130   1e-28
emb|CAN83275.1| hypothetical protein VITISV_026335 [Vitis vinifera]   130   1e-28
emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]   130   1e-28

>emb|CAN73536.1| hypothetical protein VITISV_042993 [Vitis vinifera]
          Length = 594

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/100 (66%), Positives = 75/100 (75%)
 Frame = +2

Query: 11  KADNVVARSSVEAEYRAMAHTTGELMWVQNLLRELGFLVQSPIPLHCDNQTAIHIAINPV 190
           K   VV+RSSVEAEY AMAHTT EL+W++ L  + G     PIP+HCDNQ AIHI  NPV
Sbjct: 471 KKQIVVSRSSVEAEYCAMAHTTXELIWLKALPEDFGITXTDPIPMHCDNQAAIHIVSNPV 530

Query: 191 FHERTKHIEVDCHFVREKVESKEICIPHVPSHGQLADIFT 310
           FHERTKHIEVDCHFVR  V SK+IC P  PS  Q+AD+FT
Sbjct: 531 FHERTKHIEVDCHFVRNVVTSKKICTPFTPSKDQVADMFT 570


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/100 (68%), Positives = 76/100 (76%)
 Frame = +2

Query: 11   KADNVVARSSVEAEYRAMAHTTGELMWVQNLLRELGFLVQSPIPLHCDNQTAIHIAINPV 190
            K  +VVARSS EAEYRAMA TT EL+W+Q LL +LGF    P+PL CDNQ AI+IA NPV
Sbjct: 1126 KKQSVVARSSAEAEYRAMASTTCELIWLQGLLNDLGFKRTLPMPLFCDNQAAIYIASNPV 1185

Query: 191  FHERTKHIEVDCHFVREKVESKEICIPHVPSHGQLADIFT 310
            FHERTKHIE+DCHFVREK +S  I    V S  QLADIFT
Sbjct: 1186 FHERTKHIEMDCHFVREKTQSDVIQHVFVRSTDQLADIFT 1225


>emb|CBI40600.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/100 (63%), Positives = 77/100 (77%)
 Frame = +2

Query: 11   KADNVVARSSVEAEYRAMAHTTGELMWVQNLLRELGFLVQSPIPLHCDNQTAIHIAINPV 190
            K   VVARSS EAEYRAMA  + E++W++NLL +LGF   SP+ L CDNQ A+HIA NPV
Sbjct: 829  KKQPVVARSSAEAEYRAMAAASCEMVWLKNLLTDLGFSPTSPMKLFCDNQAAMHIAANPV 888

Query: 191  FHERTKHIEVDCHFVREKVESKEICIPHVPSHGQLADIFT 310
            FHERTKHIEVDCHF+R++V+SK I   ++ S  QLAD FT
Sbjct: 889  FHERTKHIEVDCHFIRQQVQSKVIQTHYIRSSDQLADAFT 928


>emb|CAN83275.1| hypothetical protein VITISV_026335 [Vitis vinifera]
          Length = 195

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/100 (63%), Positives = 77/100 (77%)
 Frame = +2

Query: 11  KADNVVARSSVEAEYRAMAHTTGELMWVQNLLRELGFLVQSPIPLHCDNQTAIHIAINPV 190
           K   VVARSS EAEYRAMA  + E++W++NLL +LGF   SP+ L CDNQ A+HIA NPV
Sbjct: 72  KKQPVVARSSAEAEYRAMAAASCEMVWLKNLLTDLGFSPTSPMKLFCDNQAAMHIAANPV 131

Query: 191 FHERTKHIEVDCHFVREKVESKEICIPHVPSHGQLADIFT 310
           FHERTKHIEVDCHF+R++V+SK I   ++ S  QLAD FT
Sbjct: 132 FHERTKHIEVDCHFIRQQVQSKVIQTHYIRSSDQLADAFT 171


>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/100 (63%), Positives = 77/100 (77%)
 Frame = +2

Query: 11   KADNVVARSSVEAEYRAMAHTTGELMWVQNLLRELGFLVQSPIPLHCDNQTAIHIAINPV 190
            K   VVARSS EAEYRAMA  + E++W++NLL +LGF   SP+ L CDNQ A+HIA NPV
Sbjct: 1232 KKQPVVARSSAEAEYRAMAAASCEMVWLKNLLTDLGFSPTSPMKLFCDNQAAMHIAANPV 1291

Query: 191  FHERTKHIEVDCHFVREKVESKEICIPHVPSHGQLADIFT 310
            FHERTKHIEVDCHF+R++V+SK I   ++ S  QLAD FT
Sbjct: 1292 FHERTKHIEVDCHFIRQQVQSKVIQTHYIRSSDQLADAFT 1331


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