BLASTX nr result

ID: Coptis25_contig00035924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035924
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196891.1| xyloglucan:xyloglucosyl transferase [Arabidopsi...    55   8e-06
ref|XP_002873632.1| EXGT-A4 [Arabidopsis lyrata subsp. lyrata] g...    55   8e-06

>ref|NP_196891.1| xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana]
           gi|38605528|sp|Q9XIW1.1|XTH5_ARATH RecName:
           Full=Probable xyloglucan endotransglucosylase/hydrolase
           protein 5; Short=At-XTH5; Short=XTH-5; Flags: Precursor
           gi|5533315|gb|AAD45126.1|AF163822_1 endoxyloglucan
           transferase [Arabidopsis thaliana]
           gi|5139002|dbj|BAA81669.1| endoxyloglucan transferase
           [Arabidopsis thaliana] gi|10177653|dbj|BAB11115.1|
           endoxyloglucan transferase [Arabidopsis thaliana]
           gi|51970598|dbj|BAD43991.1| endoxyloglucan transferase
           [Arabidopsis thaliana] gi|332004569|gb|AED91952.1|
           xyloglucan:xyloglucosyl transferase [Arabidopsis
           thaliana]
          Length = 293

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   YNPSWSADHIKYINGGSEVHLVLDKYSG 86
           Y P+W+ DHIKY+NGGSEVHLVLDKY+G
Sbjct: 36  YFPTWAFDHIKYLNGGSEVHLVLDKYTG 63


>ref|XP_002873632.1| EXGT-A4 [Arabidopsis lyrata subsp. lyrata]
           gi|297319469|gb|EFH49891.1| EXGT-A4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 293

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   YNPSWSADHIKYINGGSEVHLVLDKYSG 86
           Y P+W+ DHIKY+NGGSEVHLVLDKY+G
Sbjct: 36  YFPTWAFDHIKYLNGGSEVHLVLDKYTG 63


Top