BLASTX nr result

ID: Coptis25_contig00035906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035906
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205...    62   6e-08
dbj|BAD07814.1| putative ribosomal protein S5 [Oryza sativa Japo...    62   6e-08
gb|EAZ21398.1| hypothetical protein OsJ_05000 [Oryza sativa Japo...    62   6e-08
gb|EAY84083.1| hypothetical protein OsI_05464 [Oryza sativa Indi...    62   6e-08
ref|XP_003573697.1| PREDICTED: uncharacterized protein LOC100830...    60   1e-07

>ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205390 [Cucumis sativus]
           gi|449524434|ref|XP_004169228.1| PREDICTED:
           uncharacterized LOC101205390 [Cucumis sativus]
          Length = 500

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +1

Query: 4   LDHTFGKKGRVLEE*IKDLADERHSLTE*KT*PLYRKG 117
           LDHTFGKKG+VLEE I+DLA+ER+SLTE K  PLYRKG
Sbjct: 305 LDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKG 342


>dbj|BAD07814.1| putative ribosomal protein S5 [Oryza sativa Japonica Group]
           gi|41053236|dbj|BAD08197.1| putative ribosomal protein
           S5 [Oryza sativa Japonica Group]
           gi|215768553|dbj|BAH00782.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 501

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +1

Query: 4   LDHTFGKKGRVLEE*IKDLADERHSLTE*KT*PLYRKG 117
           LDHTFGKKGRVLEE IKDL +ER+SLTE K  P+YRKG
Sbjct: 305 LDHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYRKG 342


>gb|EAZ21398.1| hypothetical protein OsJ_05000 [Oryza sativa Japonica Group]
          Length = 483

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +1

Query: 4   LDHTFGKKGRVLEE*IKDLADERHSLTE*KT*PLYRKG 117
           LDHTFGKKGRVLEE IKDL +ER+SLTE K  P+YRKG
Sbjct: 287 LDHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYRKG 324


>gb|EAY84083.1| hypothetical protein OsI_05464 [Oryza sativa Indica Group]
          Length = 501

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +1

Query: 4   LDHTFGKKGRVLEE*IKDLADERHSLTE*KT*PLYRKG 117
           LDHTFGKKGRVLEE IKDL +ER+SLTE K  P+YRKG
Sbjct: 305 LDHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYRKG 342


>ref|XP_003573697.1| PREDICTED: uncharacterized protein LOC100830533 [Brachypodium
           distachyon]
          Length = 516

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 4   LDHTFGKKGRVLEE*IKDLADERHSLTE*KT*PLYRKG 117
           LDHTFGKKGRVLEE IKDL +ER+SLT+ K  P+YRKG
Sbjct: 320 LDHTFGKKGRVLEEEIKDLVEERNSLTDKKRRPMYRKG 357


Top