BLASTX nr result

ID: Coptis25_contig00035902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035902
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613024.1| hypothetical protein MTR_5g031820 [Medicago ...    60   5e-11
ref|XP_003631099.1| hypothetical protein MTR_8g107120 [Medicago ...    56   2e-10
ref|XP_003616601.1| hypothetical protein MTR_5g082240 [Medicago ...    57   4e-10
ref|XP_003620586.1| hypothetical protein MTR_6g087240 [Medicago ...    58   1e-09
ref|XP_003589413.1| hypothetical protein MTR_1g023970 [Medicago ...    58   1e-09

>ref|XP_003613024.1| hypothetical protein MTR_5g031820 [Medicago truncatula]
           gi|355514359|gb|AES95982.1| hypothetical protein
           MTR_5g031820 [Medicago truncatula]
          Length = 664

 Score = 60.5 bits (145), Expect(2) = 5e-11
 Identities = 27/61 (44%), Positives = 35/61 (57%)
 Frame = -2

Query: 183 HAAVWVRFPGLSLEYWEVRNLLTFGKAIGRSIHIDKTTAKRELGYYASVYVDLDLSKSVP 4
           HA++W+R   L  EYW  R L+    A+G  I ID  T  R  G+YA + VD+DLSK   
Sbjct: 176 HASLWIRLVELPQEYWRERTLMEIASAVGTPIFIDGPTRNRSFGHYARILVDIDLSKKAY 235

Query: 3   D 1
           D
Sbjct: 236 D 236



 Score = 31.6 bits (70), Expect(2) = 5e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 295 EDFQKIWDQGSWIFDKQILRLVKWTPNFSTEKETQSHA 182
           ED +KIW  G+      +LR  +WT +F    + Q+HA
Sbjct: 140 EDLKKIWVVGTVNLKPGLLRFSQWTKDFKILTQKQTHA 177


>ref|XP_003631099.1| hypothetical protein MTR_8g107120 [Medicago truncatula]
           gi|355525121|gb|AET05575.1| hypothetical protein
           MTR_8g107120 [Medicago truncatula]
          Length = 631

 Score = 55.8 bits (133), Expect(2) = 2e-10
 Identities = 26/61 (42%), Positives = 34/61 (55%)
 Frame = -2

Query: 183 HAAVWVRFPGLSLEYWEVRNLLTFGKAIGRSIHIDKTTAKRELGYYASVYVDLDLSKSVP 4
           HA++W+R   L  EYW  R L      +G  I ID  T  R  G+YA + +D+DLSK V 
Sbjct: 175 HASLWIRLVELPQEYWCERTLKEIASVVGTPISIDGPTGNRAFGHYARILMDIDLSKRVY 234

Query: 3   D 1
           D
Sbjct: 235 D 235



 Score = 34.3 bits (77), Expect(2) = 2e-10
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 295 EDFQKIWDQGSWIFDKQILRLVKWTPNFSTEKETQSHA 182
           +D  +IW  G+      +LRL +WT +F+   + Q+HA
Sbjct: 139 DDLSRIWTAGTVSLQPGLLRLSQWTKDFNHNSQAQTHA 176


>ref|XP_003616601.1| hypothetical protein MTR_5g082240 [Medicago truncatula]
           gi|355517936|gb|AES99559.1| hypothetical protein
           MTR_5g082240 [Medicago truncatula]
          Length = 623

 Score = 57.0 bits (136), Expect(2) = 4e-10
 Identities = 26/61 (42%), Positives = 33/61 (54%)
 Frame = -2

Query: 183 HAAVWVRFPGLSLEYWEVRNLLTFGKAIGRSIHIDKTTAKRELGYYASVYVDLDLSKSVP 4
           H ++W+R   L  EYW  R L     A+G  I ID  T  R  G+YA + VD+DLSK   
Sbjct: 150 HVSIWIRLVELPQEYWRERTLKEIASAVGTPIDIDGPTRNRIFGHYARILVDIDLSKKAY 209

Query: 3   D 1
           D
Sbjct: 210 D 210



 Score = 32.0 bits (71), Expect(2) = 4e-10
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 295 EDFQKIWDQGSWIFDKQILRLVKWTPNFSTEKETQSH 185
           ED +KIW  G+      +LR  +WT +F  + + Q+H
Sbjct: 114 EDLKKIWAVGTVNLKPGLLRFSQWTKDFKFQAQKQTH 150


>ref|XP_003620586.1| hypothetical protein MTR_6g087240 [Medicago truncatula]
           gi|357500705|ref|XP_003620641.1| hypothetical protein
           MTR_6g088090 [Medicago truncatula]
           gi|355495601|gb|AES76804.1| hypothetical protein
           MTR_6g087240 [Medicago truncatula]
           gi|355495656|gb|AES76859.1| hypothetical protein
           MTR_6g088090 [Medicago truncatula]
          Length = 679

 Score = 57.8 bits (138), Expect(2) = 1e-09
 Identities = 26/61 (42%), Positives = 33/61 (54%)
 Frame = -2

Query: 183 HAAVWVRFPGLSLEYWEVRNLLTFGKAIGRSIHIDKTTAKRELGYYASVYVDLDLSKSVP 4
           H ++W+R   L  EYW  R L     A+G  I ID  T  R  G+YA + VD+DLSK   
Sbjct: 164 HVSIWIRLVELPQEYWRERTLKEIASAVGTPIDIDGPTRNRTFGHYARILVDIDLSKKAY 223

Query: 3   D 1
           D
Sbjct: 224 D 224



 Score = 29.6 bits (65), Expect(2) = 1e-09
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 295 EDFQKIWDQGSWIFDKQILRLVKWTPNFSTEKETQSH 185
           ED +KIW   +      +LR  +WT +F  + + Q+H
Sbjct: 128 EDLKKIWAADTINLKPGLLRFSQWTKDFKFQAQKQTH 164


>ref|XP_003589413.1| hypothetical protein MTR_1g023970 [Medicago truncatula]
           gi|355478461|gb|AES59664.1| hypothetical protein
           MTR_1g023970 [Medicago truncatula]
          Length = 612

 Score = 57.8 bits (138), Expect(2) = 1e-09
 Identities = 26/61 (42%), Positives = 33/61 (54%)
 Frame = -2

Query: 183 HAAVWVRFPGLSLEYWEVRNLLTFGKAIGRSIHIDKTTAKRELGYYASVYVDLDLSKSVP 4
           H ++W+R   L  EYW  R L     A+G  I ID  T  R  G+YA + VD+DLSK   
Sbjct: 164 HVSIWIRLVELPQEYWRERTLKEIASAVGTPIDIDGPTRNRTFGHYARILVDIDLSKKAY 223

Query: 3   D 1
           D
Sbjct: 224 D 224



 Score = 29.6 bits (65), Expect(2) = 1e-09
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 295 EDFQKIWDQGSWIFDKQILRLVKWTPNFSTEKETQSH 185
           ED +KIW   +      +LR  +WT +F  + + Q+H
Sbjct: 128 EDLKKIWAADTINLKPGLLRFSQWTKDFKFQAQKQTH 164


Top