BLASTX nr result

ID: Coptis25_contig00035896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035896
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173732.1| PREDICTED: chromosome-associated kinesin KIF...   117   7e-25
ref|XP_004136256.1| PREDICTED: chromosome-associated kinesin KIF...   117   7e-25
ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF...   117   7e-25
gb|EEC73989.1| hypothetical protein OsI_08901 [Oryza sativa Indi...   116   2e-24
ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF...   115   3e-24

>ref|XP_004173732.1| PREDICTED: chromosome-associated kinesin KIF4-like, partial
           [Cucumis sativus]
          Length = 443

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/71 (73%), Positives = 63/71 (88%)
 Frame = +3

Query: 90  NSHDKDCVKVAVNIRPLITTELLLGCTDCVTVVPGEPQVQIGSHVFTFDHVYGSSGSPCG 269
           +S    CV+VAVNIRPLIT EL++GCTDC+TVVPGEPQVQIGSH+FT+D+VYGS+GSP  
Sbjct: 5   SSDSSQCVRVAVNIRPLITPELMVGCTDCITVVPGEPQVQIGSHIFTYDNVYGSAGSPSY 64

Query: 270 VIYEDCVAPLV 302
            +Y+DCVAPLV
Sbjct: 65  GLYDDCVAPLV 75


>ref|XP_004136256.1| PREDICTED: chromosome-associated kinesin KIF4-like [Cucumis
           sativus]
          Length = 1274

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/71 (73%), Positives = 63/71 (88%)
 Frame = +3

Query: 90  NSHDKDCVKVAVNIRPLITTELLLGCTDCVTVVPGEPQVQIGSHVFTFDHVYGSSGSPCG 269
           +S    CV+VAVNIRPLIT EL++GCTDC+TVVPGEPQVQIGSH+FT+D+VYGS+GSP  
Sbjct: 8   SSDSSQCVRVAVNIRPLITPELMVGCTDCITVVPGEPQVQIGSHIFTYDNVYGSAGSPSY 67

Query: 270 VIYEDCVAPLV 302
            +Y+DCVAPLV
Sbjct: 68  GLYDDCVAPLV 78


>ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
          Length = 1317

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/95 (62%), Positives = 72/95 (75%)
 Frame = +3

Query: 18  KRVLRIQLKKNLWACIIKR*KMETNSHDKDCVKVAVNIRPLITTELLLGCTDCVTVVPGE 197
           +R+  +Q   N W       +ME NS    CV+VAVNIRPLIT+EL+LGCTDC+++VPGE
Sbjct: 12  QRISSLQADSNWW-------EME-NSDSAQCVRVAVNIRPLITSELMLGCTDCISLVPGE 63

Query: 198 PQVQIGSHVFTFDHVYGSSGSPCGVIYEDCVAPLV 302
           PQVQIGSH FT+D+VY SSGSP   IY+DCVAPLV
Sbjct: 64  PQVQIGSHAFTYDYVY-SSGSPSSTIYDDCVAPLV 97


>gb|EEC73989.1| hypothetical protein OsI_08901 [Oryza sativa Indica Group]
          Length = 1284

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = +3

Query: 93  SHDKDCVKVAVNIRPLITTELLLGCTDCVTVVPGEPQVQIGSHVFTFDHVYGSSGSPCGV 272
           +  KD VKVAVNIRPLIT ELLLGCTDCVTV PGEPQVQIG HVFT+DHV+GS+GSP  +
Sbjct: 7   AQQKDSVKVAVNIRPLITPELLLGCTDCVTVTPGEPQVQIGPHVFTYDHVFGSTGSPSSL 66

Query: 273 IYEDCVAPLV 302
           I+E CV PL+
Sbjct: 67  IFEQCVHPLI 76


>ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
          Length = 1299

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/71 (74%), Positives = 62/71 (87%)
 Frame = +3

Query: 90  NSHDKDCVKVAVNIRPLITTELLLGCTDCVTVVPGEPQVQIGSHVFTFDHVYGSSGSPCG 269
           NS    CV+VAVN+RPLIT+EL+LGCTDC++VVPGEPQVQIGSH FT+D+VY SSGSP  
Sbjct: 3   NSDSAQCVRVAVNVRPLITSELMLGCTDCISVVPGEPQVQIGSHAFTYDYVY-SSGSPSS 61

Query: 270 VIYEDCVAPLV 302
            IY+DCVAPLV
Sbjct: 62  AIYDDCVAPLV 72


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