BLASTX nr result

ID: Coptis25_contig00035894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035894
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77889.1| hypothetical protein VITISV_003778 [Vitis vinifera]   114   6e-24
emb|CAN78089.1| hypothetical protein VITISV_042921 [Vitis vinifera]   110   9e-23
emb|CAN63412.1| hypothetical protein VITISV_011051 [Vitis vinifera]   102   3e-20
emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]   101   6e-20
emb|CAN74112.1| hypothetical protein VITISV_025549 [Vitis vinifera]    97   1e-18

>emb|CAN77889.1| hypothetical protein VITISV_003778 [Vitis vinifera]
          Length = 934

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/140 (38%), Positives = 81/140 (57%)
 Frame = -2

Query: 425 RKRAPKAITRFKCEARFEVGYDFQVKLWIVKDFVGDHTHSLVSYPSSMFG*SHRKVPQHD 246
           RK+ PKA+TR  CE  F +G++ Q+  W+VK+F+ DH H LV   +  F  SHR +   D
Sbjct: 253 RKQEPKAVTRVGCETTFRIGFNKQMNKWVVKEFMADHNHPLVEQKNVQFLRSHRVIKNAD 312

Query: 245 LEYARTLNDVDIRHCKIMDIFVHRARDFSNIGFLKKDLYNKLGYDRRIFCIDGDVNTLLG 66
                 +  V I   +IMD  V ++  ++N+GF KKDLYN +  DRR+   DGD    L 
Sbjct: 313 KAQLNAMRGVGIGTSQIMDYMVQQSGGYNNVGFTKKDLYNHVDADRRVHLRDGDAEGALA 372

Query: 65  YMDSKTKADLFFHHNYQLNE 6
           Y+  K++ D  F++ Y ++E
Sbjct: 373 YLCGKSEMDPSFYYKYNVDE 392


>emb|CAN78089.1| hypothetical protein VITISV_042921 [Vitis vinifera]
          Length = 1066

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/140 (37%), Positives = 81/140 (57%)
 Frame = -2

Query: 425 RKRAPKAITRFKCEARFEVGYDFQVKLWIVKDFVGDHTHSLVSYPSSMFG*SHRKVPQHD 246
           RKR PKA+TR  CEA F +G++ Q+  W+VK+F+ DH H LV   +  F  SHR +    
Sbjct: 412 RKREPKAVTRVGCEATFRIGFNKQMNKWVVKEFMADHNHPLVEQKNIQFLRSHRVIKNAA 471

Query: 245 LEYARTLNDVDIRHCKIMDIFVHRARDFSNIGFLKKDLYNKLGYDRRIFCIDGDVNTLLG 66
                 +  V +   +IMD  V ++  ++N+GF KK LYN +  DRR+   DGD   +L 
Sbjct: 472 KAQLNAMRGVGMGTSQIMDYMVQQSGGYNNVGFTKKYLYNHVDADRRVHLRDGDAEGVLA 531

Query: 65  YMDSKTKADLFFHHNYQLNE 6
           Y+  K++ D  F++ Y ++E
Sbjct: 532 YLCGKSEMDPSFYYKYNVDE 551


>emb|CAN63412.1| hypothetical protein VITISV_011051 [Vitis vinifera]
          Length = 782

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/141 (36%), Positives = 79/141 (56%)
 Frame = -2

Query: 428 KRKRAPKAITRFKCEARFEVGYDFQVKLWIVKDFVGDHTHSLVSYPSSMFG*SHRKVPQH 249
           KR+R P+++TR  CEA F VG + +   WIVK+F+GDH H+LV   ++ F  SHR +   
Sbjct: 123 KRQREPRSLTRVGCEAAFRVGLNRKDGKWIVKEFIGDHNHNLVDAINTQFLRSHRTISNP 182

Query: 248 DLEYARTLNDVDIRHCKIMDIFVHRARDFSNIGFLKKDLYNKLGYDRRIFCIDGDVNTLL 69
           D      L  V ++  +IMD  V ++    ++GF +KD+YN +   RR    DGD    L
Sbjct: 183 DKAQVDXLRKVGVKTTQIMDYMVKQSGGHEHVGFTQKDIYNHVDXMRRSEIKDGDAEAAL 242

Query: 68  GYMDSKTKADLFFHHNYQLNE 6
            Y+  K + D  F + + ++E
Sbjct: 243 AYLCGKXEMDSXFFYKFNIDE 263


>emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]
          Length = 876

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/141 (36%), Positives = 79/141 (56%)
 Frame = -2

Query: 428 KRKRAPKAITRFKCEARFEVGYDFQVKLWIVKDFVGDHTHSLVSYPSSMFG*SHRKVPQH 249
           KR+R P+++TR  CEA F VG + +   WIVK+F+GDH H+LV   ++ F  SHR +   
Sbjct: 112 KRQREPRSLTRVGCEAAFRVGLNRKDGKWIVKEFIGDHNHNLVDAINTQFLRSHRTISNP 171

Query: 248 DLEYARTLNDVDIRHCKIMDIFVHRARDFSNIGFLKKDLYNKLGYDRRIFCIDGDVNTLL 69
           D      L  V ++  +IMD  V ++    ++GF +KD+YN +   RR    DGD    L
Sbjct: 172 DKAQVDGLRKVGVKTTQIMDYMVKQSGGHEHVGFXQKDIYNHVDAMRRSEIKDGDAEAAL 231

Query: 68  GYMDSKTKADLFFHHNYQLNE 6
            Y+  K + D  F + + ++E
Sbjct: 232 AYLCGKAEMDSSFFYKFNIDE 252


>emb|CAN74112.1| hypothetical protein VITISV_025549 [Vitis vinifera]
          Length = 619

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/127 (38%), Positives = 72/127 (56%)
 Frame = -2

Query: 428 KRKRAPKAITRFKCEARFEVGYDFQVKLWIVKDFVGDHTHSLVSYPSSMFG*SHRKVPQH 249
           KR+R P+++TR  CEA F VG + +   WIVK+F+GDH H+LV+  ++ F  SHR +   
Sbjct: 122 KRQREPRSLTRVGCEAAFRVGLNRKDGKWIVKEFIGDHNHNLVNAINTQFIRSHRTISNP 181

Query: 248 DLEYARTLNDVDIRHCKIMDIFVHRARDFSNIGFLKKDLYNKLGYDRRIFCIDGDVNTLL 69
           D      L  V ++  +IMD  V +     ++GF +KD+YN     R+I   DGD    L
Sbjct: 182 DKAQVDVLRKVGVKTTQIMDYMVKQLGGHKHVGFTQKDMYNHFDAMRKIEIKDGDAEAAL 241

Query: 68  GYMDSKT 48
            Y+  KT
Sbjct: 242 AYLCGKT 248


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