BLASTX nr result

ID: Coptis25_contig00035888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035888
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306638.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
dbj|BAJ33909.1| unnamed protein product [Thellungiella halophila]      69   3e-10
ref|XP_002284499.2| PREDICTED: chlorophyllide a oxygenase, chlor...    69   5e-10
ref|XP_002513757.1| chlorophyll synthase, putative [Ricinus comm...    68   9e-10
ref|XP_004150439.1| PREDICTED: chlorophyllide a oxygenase, chlor...    67   2e-09

>ref|XP_002306638.1| predicted protein [Populus trichocarpa] gi|222856087|gb|EEE93634.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/54 (61%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
 Frame = +2

Query: 137 RTSKLQAKK-LKGGFKVFAIFGEEEGLVEKKNTWGTLFNVEEPRTRILQSKGKF 295
           R+SKL  KK ++GGF+VFA+ GEE GL++KK+TWG LF+VE+PR+++ Q KGKF
Sbjct: 18  RSSKLNCKKGVRGGFRVFAVLGEEGGLLDKKSTWGPLFDVEDPRSKMPQFKGKF 71


>dbj|BAJ33909.1| unnamed protein product [Thellungiella halophila]
          Length = 534

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +2

Query: 137 RTSKLQAKK-LKGGFKVFAIFGEEEGLVEKKNTWGTLFNVEEPRTRILQSKGKF 295
           R+SKL  KK +KG F+VFA+FGEE GLVEKK+ WG LF+VE+PR++    KGKF
Sbjct: 21  RSSKLSRKKGVKGEFRVFAVFGEEGGLVEKKSQWGPLFDVEDPRSKTPPFKGKF 74


>ref|XP_002284499.2| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Vitis
           vinifera] gi|302141810|emb|CBI19013.3| unnamed protein
           product [Vitis vinifera]
          Length = 537

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/53 (58%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = +2

Query: 140 TSKLQAKK-LKGGFKVFAIFGEEEGLVEKKNTWGTLFNVEEPRTRILQSKGKF 295
           TSK+  KK  + G +VFA+FG+E G VE+K+TWGT+F+VE+PR++  QSKGKF
Sbjct: 19  TSKINTKKGERRGLRVFAVFGDESGSVERKSTWGTIFDVEDPRSKFPQSKGKF 71


>ref|XP_002513757.1| chlorophyll synthase, putative [Ricinus communis]
           gi|223546843|gb|EEF48340.1| chlorophyll synthase,
           putative [Ricinus communis]
          Length = 535

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/54 (57%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = +2

Query: 137 RTSKLQAKK-LKGGFKVFAIFGEEEGLVEKKNTWGTLFNVEEPRTRILQSKGKF 295
           R+SK  +KK ++GGF VFA+FGEE G+++KK+ W TLF+VE+PR+++ Q KGKF
Sbjct: 18  RSSKHNSKKGVRGGFGVFAVFGEEGGVLDKKSVWSTLFDVEDPRSKMPQLKGKF 71


>ref|XP_004150439.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
           sativus] gi|449513335|ref|XP_004164299.1| PREDICTED:
           chlorophyllide a oxygenase, chloroplastic-like [Cucumis
           sativus]
          Length = 534

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/56 (57%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
 Frame = +2

Query: 131 FYRTSKLQAKK-LKGGFKVFAIFGEEEGLVEKKNTWGTLFNVEEPRTRILQSKGKF 295
           F ++ +L  KK +KGGF+VFA+FGEE G +E+K+ W TLF+VE+PRT++ Q KGKF
Sbjct: 16  FSKSPRLNFKKSVKGGFRVFAVFGEE-GAIERKSGWETLFDVEDPRTKVPQCKGKF 70


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