BLASTX nr result

ID: Coptis25_contig00035879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035879
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29836.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002284093.1| PREDICTED: AP2-like ethylene-responsive tran...   107   1e-21
emb|CAN82222.1| hypothetical protein VITISV_011870 [Vitis vinifera]   107   1e-21
ref|XP_004159637.1| PREDICTED: AP2-like ethylene-responsive tran...   104   7e-21
ref|XP_004159636.1| PREDICTED: AP2-like ethylene-responsive tran...   104   7e-21

>emb|CBI29836.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/78 (73%), Positives = 61/78 (78%)
 Frame = +3

Query: 21  MASSSCEPKLKAEAIAVVESTGGGETSENVMDHHNLLIYRGLKKAKKERGCTAKERISKM 200
           MASSS EP LK E+      +GGGETSE  +    LL+YRGLKKAKKERG TAKERISKM
Sbjct: 1   MASSSSEPGLKPES-GGGSGSGGGETSEAAVASDQLLLYRGLKKAKKERGSTAKERISKM 59

Query: 201 PPCVAGKRSSIYRGVTRH 254
           PPC AGKRSSIYRGVTRH
Sbjct: 60  PPCAAGKRSSIYRGVTRH 77


>ref|XP_002284093.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At2g41710-like [Vitis vinifera]
          Length = 429

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/78 (73%), Positives = 61/78 (78%)
 Frame = +3

Query: 21  MASSSCEPKLKAEAIAVVESTGGGETSENVMDHHNLLIYRGLKKAKKERGCTAKERISKM 200
           MASSS EP LK E+      +GGGETSE  +    LL+YRGLKKAKKERG TAKERISKM
Sbjct: 1   MASSSSEPGLKPES-GGGSGSGGGETSEAAVASDQLLLYRGLKKAKKERGSTAKERISKM 59

Query: 201 PPCVAGKRSSIYRGVTRH 254
           PPC AGKRSSIYRGVTRH
Sbjct: 60  PPCAAGKRSSIYRGVTRH 77


>emb|CAN82222.1| hypothetical protein VITISV_011870 [Vitis vinifera]
          Length = 492

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/78 (73%), Positives = 61/78 (78%)
 Frame = +3

Query: 21  MASSSCEPKLKAEAIAVVESTGGGETSENVMDHHNLLIYRGLKKAKKERGCTAKERISKM 200
           MASSS EP LK E+      +GGGETSE  +    LL+YRGLKKAKKERG TAKERISKM
Sbjct: 62  MASSSSEPGLKPES-GGGSGSGGGETSEAAVASDQLLLYRGLKKAKKERGSTAKERISKM 120

Query: 201 PPCVAGKRSSIYRGVTRH 254
           PPC AGKRSSIYRGVTRH
Sbjct: 121 PPCAAGKRSSIYRGVTRH 138


>ref|XP_004159637.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At2g41710-like isoform 2 [Cucumis sativus]
          Length = 429

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/81 (69%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
 Frame = +3

Query: 21  MASSSCEPKLKAEAIAVVESTGG---GETSENVMDHHNLLIYRGLKKAKKERGCTAKERI 191
           MASSS +P  K E  A   +  G    E+SE VM +  LL+YRGLKKAKKERGCTAKERI
Sbjct: 1   MASSSSDPGFKHEPGACSTAAAGRGTAESSEVVMANDQLLLYRGLKKAKKERGCTAKERI 60

Query: 192 SKMPPCVAGKRSSIYRGVTRH 254
           SKMPPC AGKRSSIYRGVTRH
Sbjct: 61  SKMPPCAAGKRSSIYRGVTRH 81


>ref|XP_004159636.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At2g41710-like isoform 1 [Cucumis sativus]
          Length = 432

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/81 (69%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
 Frame = +3

Query: 21  MASSSCEPKLKAEAIAVVESTGG---GETSENVMDHHNLLIYRGLKKAKKERGCTAKERI 191
           MASSS +P  K E  A   +  G    E+SE VM +  LL+YRGLKKAKKERGCTAKERI
Sbjct: 1   MASSSSDPGFKHEPGACSTAAAGRGTAESSEVVMANDQLLLYRGLKKAKKERGCTAKERI 60

Query: 192 SKMPPCVAGKRSSIYRGVTRH 254
           SKMPPC AGKRSSIYRGVTRH
Sbjct: 61  SKMPPCAAGKRSSIYRGVTRH 81


Top