BLASTX nr result

ID: Coptis25_contig00035875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035875
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271629.1| PREDICTED: microtubule-associated protein 70...   104   9e-21
emb|CAN80140.1| hypothetical protein VITISV_038977 [Vitis vinifera]   104   9e-21
ref|XP_004144334.1| PREDICTED: microtubule-associated protein 70...    89   3e-16
ref|XP_002284904.1| PREDICTED: microtubule-associated protein 70...    88   6e-16
ref|XP_002323245.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16

>ref|XP_002271629.1| PREDICTED: microtubule-associated protein 70-2 [Vitis vinifera]
           gi|297739948|emb|CBI30130.3| unnamed protein product
           [Vitis vinifera]
          Length = 603

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/96 (58%), Positives = 67/96 (69%)
 Frame = +2

Query: 32  MEDSHMENGEFAPLSNTSLRPXXXXXXXXXXXXXXXXXXXGRAGSDIDDFINLLHGSDPV 211
           M + H+ NGE  P S+ SL+P                    RAGS+++D INLLHGSDPV
Sbjct: 1   MANIHISNGEAGP-SSDSLKPMVLTSSASFKARKKPTI--SRAGSEVEDVINLLHGSDPV 57

Query: 212 KVELNRLENEVKEKDRELGDAHAEIKGLKYSERLKD 319
           +VELNRLENEV++KDRELGDAHAEIK LKYSERLK+
Sbjct: 58  RVELNRLENEVRDKDRELGDAHAEIKALKYSERLKE 93


>emb|CAN80140.1| hypothetical protein VITISV_038977 [Vitis vinifera]
          Length = 658

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/96 (58%), Positives = 67/96 (69%)
 Frame = +2

Query: 32  MEDSHMENGEFAPLSNTSLRPXXXXXXXXXXXXXXXXXXXGRAGSDIDDFINLLHGSDPV 211
           M + H+ NGE  P S+ SL+P                    RAGS+++D INLLHGSDPV
Sbjct: 1   MANIHISNGEAGP-SSDSLKPMVLTSSASFKARKKPTI--SRAGSEVEDVINLLHGSDPV 57

Query: 212 KVELNRLENEVKEKDRELGDAHAEIKGLKYSERLKD 319
           +VELNRLENEV++KDRELGDAHAEIK LKYSERLK+
Sbjct: 58  RVELNRLENEVRDKDRELGDAHAEIKALKYSERLKE 93


>ref|XP_004144334.1| PREDICTED: microtubule-associated protein 70-2-like [Cucumis
           sativus]
          Length = 612

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/55 (76%), Positives = 50/55 (90%)
 Frame = +2

Query: 155 RAGSDIDDFINLLHGSDPVKVELNRLENEVKEKDRELGDAHAEIKGLKYSERLKD 319
           RAGSD+DD I LLHGSDPV+VELNRLENEV++K+RELG+A AE+K LK SERLK+
Sbjct: 46  RAGSDVDDIITLLHGSDPVRVELNRLENEVRDKERELGEALAEVKSLKNSERLKE 100


>ref|XP_002284904.1| PREDICTED: microtubule-associated protein 70-2 [Vitis vinifera]
           gi|297737627|emb|CBI26828.3| unnamed protein product
           [Vitis vinifera]
          Length = 637

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/55 (74%), Positives = 49/55 (89%)
 Frame = +2

Query: 155 RAGSDIDDFINLLHGSDPVKVELNRLENEVKEKDRELGDAHAEIKGLKYSERLKD 319
           R   D D+FINLLHGSDPVKVELNRLENEV++KDRELG+A AEIK L++SERL++
Sbjct: 62  RPSLDADEFINLLHGSDPVKVELNRLENEVRDKDRELGEAQAEIKALRFSERLRE 116


>ref|XP_002323245.1| predicted protein [Populus trichocarpa] gi|222867875|gb|EEF05006.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/55 (76%), Positives = 49/55 (89%)
 Frame = +2

Query: 155 RAGSDIDDFINLLHGSDPVKVELNRLENEVKEKDRELGDAHAEIKGLKYSERLKD 319
           RAGSD+D+ I LLHGSDPV+VELNRLENE+++KDRELGDA AEIK LK SER K+
Sbjct: 51  RAGSDVDEIITLLHGSDPVRVELNRLENELRDKDRELGDALAEIKSLKNSERSKE 105


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