BLASTX nr result

ID: Coptis25_contig00035870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035870
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24397.1| unknown [Picea sitchensis]                              70   1e-10
gb|ADE77795.1| unknown [Picea sitchensis]                              64   2e-08

>gb|ABK24397.1| unknown [Picea sitchensis]
          Length = 350

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
 Frame = -3

Query: 422 DPGDQVGQRVSGMIETEIECGYLISVTVGTEKLNGVLYHL-KDTSVEQFAVVPSLVDGVL 246
           DPG  VGQ V+G ++   + GYL++V VG+EKL GVLYH+  +++V+Q+A+VP L+  V 
Sbjct: 33  DPGAYVGQTVTGAVDQRFDNGYLVTVVVGSEKLKGVLYHVPTESTVQQYAMVPGLMSNV- 91

Query: 245 SEDSGSEPIGLKVLVGSTKQEAESVSSPKKESHRKSTLASSSKDEXXXXXXXXXXXXKQR 66
               G + +GL+V V  TK+  E +                                  +
Sbjct: 92  ----GCDALGLEVQV--TKKRKERI---------------------------------PK 112

Query: 65  KEQDAPRGTRSAYQFFISKEC 3
           ++  APR +++ Y+FF  ++C
Sbjct: 113 RDPSAPRLSKTGYKFFYVEQC 133


>gb|ADE77795.1| unknown [Picea sitchensis]
          Length = 342

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
 Frame = -3

Query: 422 DPGDQVGQRVSGMIETEIECGYLISVTVGTEKLNGVLYHL-KDTSVEQFAVVPSLVDGVL 246
           DPG  VG   +G I+ + + GY ++V VG+EKL+G+LYH+  + +  QFA +P L+  V 
Sbjct: 32  DPGASVGHIATGAIDGKFDNGYFVTVVVGSEKLHGILYHVPTENASPQFANIPGLIKSVG 91

Query: 245 SEDSGSEPIGLKVLVGSTKQEAESVSSPKKESHRKSTLASSSKDEXXXXXXXXXXXXKQR 66
           SE    + +GL+V V   K+E                                      +
Sbjct: 92  SE---LDALGLQVQVTKKKKE-----------------------------------IALK 113

Query: 65  KEQDAPRGTRSAYQFFISKEC 3
           K+ +APR  + +Y FF +++C
Sbjct: 114 KDPNAPRPAKKSYNFFYAEQC 134


Top