BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035864
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]              210   8e-53
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   210   8e-53
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   201   7e-50

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  210 bits (535), Expect = 8e-53
 Identities = 107/146 (73%), Positives = 123/146 (84%)
 Frame = +1

Query: 1   KLAGLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCL 180
           K+AG RPDKITFVSVIS+CSELATLGQGQQ+HA+ IK+GA   VSV SSL+SMYS+CGCL
Sbjct: 277 KMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCL 336

Query: 181 EDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYA 360
           E SLKVFLE E + D V WSSMIAAYGFHG G EAI LF QME++ +E NDVTFLSLLYA
Sbjct: 337 EYSLKVFLECE-NGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYA 395

Query: 361 CSHRGLKERGTELFRLMVDEYKLKPR 438
           CSH GLKE+G + F LMV++Y +KPR
Sbjct: 396 CSHCGLKEKGIKFFDLMVEKYGVKPR 421



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/130 (30%), Positives = 69/130 (53%)
 Frame = +1

Query: 10  GLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCLEDS 189
           G  PD+    SV+  C+ L  L  G+QVH    K G + ++ V SSL  MY KCG L + 
Sbjct: 179 GFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEG 238

Query: 190 LKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYACSH 369
            ++ +      + V W+++IA    +G+ +E +  +  M+  G  P+ +TF+S++ +CS 
Sbjct: 239 ERL-IRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSE 297

Query: 370 RGLKERGTEL 399
                +G ++
Sbjct: 298 LATLGQGQQI 307


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  210 bits (535), Expect = 8e-53
 Identities = 107/146 (73%), Positives = 123/146 (84%)
 Frame = +1

Query: 1   KLAGLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCL 180
           K+AG RPDKITFVSVIS+CSELATLGQGQQ+HA+ IK+GA   VSV SSL+SMYS+CGCL
Sbjct: 277 KMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCL 336

Query: 181 EDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYA 360
           E SLKVFLE E + D V WSSMIAAYGFHG G EAI LF QME++ +E NDVTFLSLLYA
Sbjct: 337 EYSLKVFLECE-NGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYA 395

Query: 361 CSHRGLKERGTELFRLMVDEYKLKPR 438
           CSH GLKE+G + F LMV++Y +KPR
Sbjct: 396 CSHCGLKEKGIKFFDLMVEKYGVKPR 421



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/130 (30%), Positives = 69/130 (53%)
 Frame = +1

Query: 10  GLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCLEDS 189
           G  PD+    SV+  C+ L  L  G+QVH    K G + ++ V SSL  MY KCG L + 
Sbjct: 179 GFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEG 238

Query: 190 LKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYACSH 369
            ++ +      + V W+++IA    +G+ +E +  +  M+  G  P+ +TF+S++ +CS 
Sbjct: 239 ERL-IRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSE 297

Query: 370 RGLKERGTEL 399
                +G ++
Sbjct: 298 LATLGQGQQI 307


>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  210 bits (534), Expect = 1e-52
 Identities = 103/146 (70%), Positives = 126/146 (86%)
 Frame = +1

Query: 1   KLAGLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCL 180
           K++GLRPDKIT VSVIS+ +ELATL QGQQ+HA+AIK+GA+++V+V SSL+SMYSKCGCL
Sbjct: 182 KMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCL 241

Query: 181 EDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYA 360
           EDS+K  L+ E  D  VLWSSMIAAYGFHG G+EA+ LFEQME++G+  NDVTFLSLLYA
Sbjct: 242 EDSMKALLDCEHPDS-VLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYA 300

Query: 361 CSHRGLKERGTELFRLMVDEYKLKPR 438
           CSH GLKE+G   F+LMV++Y LKPR
Sbjct: 301 CSHNGLKEKGMGFFKLMVEKYGLKPR 326



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/130 (30%), Positives = 70/130 (53%)
 Frame = +1

Query: 10  GLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCLEDS 189
           G  PD+ T  SV+  C+ L     G+QVHA  +K G + ++ V SSL  MY K G L + 
Sbjct: 84  GFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEG 143

Query: 190 LKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYACSH 369
            KV ++     + V W+++IA    +GH +  + L+  M+  G+ P+ +T +S++ + + 
Sbjct: 144 EKV-IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAE 202

Query: 370 RGLKERGTEL 399
                +G ++
Sbjct: 203 LATLFQGQQI 212


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/146 (70%), Positives = 124/146 (84%)
 Frame = +1

Query: 1   KLAGLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCL 180
           K+AG RPDKITFVSV+S CSELATLGQGQQ+HA+ IK+GA + ++V SSL+SMYS+ GCL
Sbjct: 287 KMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCL 346

Query: 181 EDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYA 360
           EDS+K F++ E+ D  VLWSSMIAAYGFHG G+EA++LF QME   +E N+VTFLSLLYA
Sbjct: 347 EDSIKAFVDRENFDV-VLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYA 405

Query: 361 CSHRGLKERGTELFRLMVDEYKLKPR 438
           CSH GLKE+GTE F LMV +YKLKPR
Sbjct: 406 CSHSGLKEKGTEYFDLMVKKYKLKPR 431



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/130 (34%), Positives = 70/130 (53%)
 Frame = +1

Query: 10  GLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCLEDS 189
           G  PD+ T  SV+  C+ L +L  GQ+VHA  +K G + S  V SSL  MY K G L D 
Sbjct: 189 GFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDG 248

Query: 190 LKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYACSH 369
            K+ ++       V W+++IA    +G  +E +  +  M+  G  P+ +TF+S+L ACS 
Sbjct: 249 EKL-IKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSE 307

Query: 370 RGLKERGTEL 399
                +G ++
Sbjct: 308 LATLGQGQQI 317


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/146 (67%), Positives = 123/146 (84%)
 Frame = +1

Query: 1   KLAGLRPDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCL 180
           K+AG RPDKITFVSVIS+CSELA L QG+Q+HA+A+K+GA + VSV SSLVSMYS+CGCL
Sbjct: 294 KMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCL 353

Query: 181 EDSLKVFLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYA 360
           +DS+K FLE + + D VLWSSMIAAYGFHG G+EAIKLF +ME++ +  N++TFLSLLYA
Sbjct: 354 QDSIKTFLECK-ERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYA 412

Query: 361 CSHRGLKERGTELFRLMVDEYKLKPR 438
           CSH GLK++G  LF +MV +Y LK R
Sbjct: 413 CSHCGLKDKGLGLFDMMVKKYGLKAR 438



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/127 (29%), Positives = 68/127 (53%)
 Frame = +1

Query: 19  PDKITFVSVISTCSELATLGQGQQVHAQAIKSGADASVSVRSSLVSMYSKCGCLEDSLKV 198
           PD+ +  SV+  C+ L  L  GQQVHA  +K G + ++ V  SL  MY K G + D  +V
Sbjct: 199 PDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERV 258

Query: 199 FLEPEDDDDDVLWSSMIAAYGFHGHGQEAIKLFEQMEKKGIEPNDVTFLSLLYACSHRGL 378
            +    D   V W+++++     G+ +  +  +  M+  G  P+ +TF+S++ +CS   +
Sbjct: 259 -INWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAI 317

Query: 379 KERGTEL 399
             +G ++
Sbjct: 318 LCQGKQI 324